Thamnophis sirtalis (common garter snake): 106539602
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Entry
106539602 CDS
T06107
Symbol
EXD2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106539602 (EXD2)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
106539602 (EXD2)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106539602 (EXD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Motif
Other DBs
NCBI-GeneID:
106539602
NCBI-ProteinID:
XP_013909889
UniProt:
A0A6I9X3M4
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MPRPTAVTVTVATLFGIAAGSLAVWRVIQRRKHKTCLTPSQGGNIKEWEKKNISEDIFHS
FLPSPTICWLEEILEAKVIIISEAEKWHEVEPILTKELECCPVLGIDCEWVSVEGKKAKP
VSLLQLAACNGLCLLLRLPQLTSGGQVLPKTLLEVLSDGKILKVGVGCWEDASKLFHDYS
VTVKGTVDLRYLALRHSKTFSTNGLSLKSLAEKLLQYSLDKSLHLCCSNWETEQLTQEQI
NYAARDAQVSVALFLHLVNLPCPPCASGDGHVLPAWEKVLRKCQGLVDVPFKGKNNSFGD
DENPGNVDQSPQHKKLPSSPINQQGKDPRKHKRKPLGVGYSARRSPLYDNCFLHAPDGQP
LCTCDRKKAQWYLDKGIGELVNMEPFTVRLKFEPSGRPESTVDYYLTVKENLCVVCGKKE
SYIRKNIVPHEYRKHFPIQMKDHNSHDVLLLCTACHALSNYYDNHLKQQLAEEFCAPIGC
EEGVRLLEDPTRRLVRSAARALVNADSLPAARKEELLQLIRDFFASDTVSPEMVQEAAGL
ETRIFNENYVPHGLKVVQSFAQGGLYALMGLEKRWRQHFLDVMQPKHLPAQWSVDHNHDK
LIKKYGETLQIELS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaccaacagcagtcactgttactgtggctaccctatttggcattgcagcagga
agtctagctgtctggagggtcatccaacgtcgaaaacataaaacctgccttacaccaagt
caaggaggaaatattaaggaatgggaaaagaaaaatatctcagaagacatttttcattca
tttttaccttctcccacaatttgttggctggaggagatccttgaggcaaaagtaataatc
atttctgaggcagaaaagtggcatgaagtggaacccatattaacaaaagagttggaatgt
tgcccagtccttggaattgactgtgagtgggtctcagtggaaggaaaaaaggccaagcct
gtttctctcttacaattagctgcttgtaatggactttgcctccttcttcgtttgccccag
ctgaccagtgggggacaagttcttccaaagactttgcttgaagttctgtcagatggcaaa
atcctaaaagttggggtaggatgttgggaagatgccagtaagttatttcatgactatagt
gtaactgtcaaagggactgtggacctccgctatctggccctaagacatagtaagaccttc
tccacaaatgggctcagcctgaaatctcttgccgaaaagcttctccaatattcgcttgac
aaatctctgcacttgtgctgcagcaattgggaaacagaacaattaactcaagaacagatt
aattatgctgctcgagatgcacaggtgtcagtggctttgttcctccacctagtgaacctt
ccctgccccccttgtgcatcaggtgatggacatgttcttcctgcttgggaaaaggttctg
aggaaatgtcagggtttggtggatgtacccttcaagggaaaaaataatagctttggtgat
gatgaaaatccaggaaatgtggaccaaagcccacagcataagaaacttccatcctcccca
atcaaccaacaggggaaggatcctcggaagcacaaaaggaagcctctgggtgtaggatat
tcagccaggagatctcccttgtatgataattgcttcttgcatgctccagatgggcagcct
ttatgtacatgtgatcgcaagaaagcccagtggtatctggacaaaggcattggagaatta
gtaaacatggagccatttactgtgagattaaagtttgagccctctggacgccctgaatca
actgtggattattacttgacagtcaaagaaaatctgtgtgttgtgtgtggcaaaaaagaa
tcttacattcgaaagaacattgtacctcacgagtaccggaaacactttcccattcagatg
aaagaccacaattcccatgatgtgctccttctctgcaccgcgtgtcatgcactctctaat
tactatgataatcatctcaagcaacaactggctgaagaattttgtgcccctattggttgc
gaggagggcgttcgcttgctcgaagatcccacccgcagattagtccggtcggcagctaga
gcgcttgtgaatgcagacagcctacctgctgccaggaaggaagagctgttgcagctgatc
agggatttctttgcatctgacacggtttccccagagatggtgcaggaagcagctggactg
gaaaccaggatttttaacgagaactatgtaccacatggcttgaaagtggttcagtctttt
gctcaagggggcttatatgctctcatggggctggagaaacgttggcgccagcacttcttg
gatgttatgcagcccaagcatctcccagcacaatggtctgttgatcacaatcatgacaag
ttgatcaagaaatacggggagactctccagattgaactttcatga
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