Thamnophis sirtalis (common garter snake): 106540064
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Entry
106540064 CDS
T06107
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04620
Toll-like receptor signaling pathway
tsr04621
NOD-like receptor signaling pathway
tsr04622
RIG-I-like receptor signaling pathway
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106540064 (TRAF3)
04621 NOD-like receptor signaling pathway
106540064 (TRAF3)
04622 RIG-I-like receptor signaling pathway
106540064 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106540064 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Cast
zf-C3HC4
Sina_ZnF
Med28
ATG16
Spc29
GAS
MPS2
FliJ
zf-RING_6
DUF1664
Crescentin
SPATA24
THOC7
KIF9
KxDL
T3SSipB
BLOC1_2
ADIP
Motif
Other DBs
NCBI-GeneID:
106540064
NCBI-ProteinID:
XP_013910529
UniProt:
A0A6I9Y1A1
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDGSKKADPPVLVETKQQKANPDRHPMPSIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPRQTECGHRYCETCMSSLFSSTSPKCTACQETIVKDKIFKDNCCRRELLALQIFCRNEN
KGCRDQLTLGQLLTHLRNDCLFEELPCPRTDCKEKILRKDLPDHIEKNCNYRETTCKYCK
SQVPIIMIQKHEDADCPSVMVTCPHQCSVSALLRRELNAHLSECINAPSTCSFKRYGCTF
QGTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRSNETKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADNMKSSVESLQNRV
TELESIDKNAGQGARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagcaagaaagcagaccctccagttttagtggaaacaaaacagcagaaggca
aatcctgatcgccaccctatgccatccatttatgtaccagaacaaggtggttacaaagaa
aaatttgtgaatgcagtggaagacaaatacaaatgtgaaaaatgtcatctcattttgtgc
aatccaagacagacagaatgtgggcatcgctattgtgagacctgcatgagttctctgttc
agttctacaagtccaaaatgtacagcatgtcaagaaacaatagtgaaggataagatattt
aaagataattgctgccgaagggagcttctagcccttcagatattctgtagaaatgaaaat
aaaggttgtcgagatcaattgaccttgggacagttgctgacacatctaagaaatgactgt
ctctttgaagaactcccatgtcctcgtactgattgtaaagaaaaaatactgagaaaagat
ttaccagatcatatagaaaaaaactgtaactatcgggaaacaacatgtaaatactgtaaa
agccaagtaccaatcattatgatacaaaaacatgaagatgcagactgtccttctgtaatg
gttacatgtcctcatcagtgcagtgtttcagcactcctcagaagagagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccagcaagttaaagcacatgaagccacctcagcagtgcagcatgtagac
ttattgaaagaatggagtaattgtctagaaaacaaggtggccatgctccaaaatgaaagc
ttggaaaagaacaagagcatacaaactttacataatcaaatctgtagctttgaaatagaa
attgagagacagaaggaaatgctgcgaagtaatgaaactaaaatacatcacttacagcgg
gtaatagatagtcaagctgagaagctgaaagaactagacaaggagattcgacctttccga
cagaactgggaagaagcagacaacatgaagagtagtgttgagtcccttcagaacagggtg
actgaactggaaagcattgataaaaatgctgggcaaggagctagaaacacaggtcttcta
gaatcacagttatctaggcatgatcaaatgctaagtgttcatgacatccgtctggctgac
atggatctccgatttcaagtcctggaaacagcaagttacaatggagtattaatctggaaa
attcgagattacaaacgtcgaaagcaagaggcggttatggggaagactttgtccttatat
agccaaccattttatacaggatactttggctataagatgtgtgccagggtttacctcaat
ggagatgggatgggcaaagggacgcacttgtctttgttctttgttataatgcggggagaa
tatgatgcattgcttccttggccattcaagcaaaaggtcacccttatgttgatggatcaa
ggaccttctcggcgccacttaggagatgcattcaagccagaccccaacagcagtagtttc
aagaaacccactggggaaatgaatattgcatctggttgtccagtctttgttgcacaaact
gttctagaaaatggaacatatattaaagatgatactatttttattaaagtcatagtggac
acttcggatctaccagacccctga
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integrated database retrieval system
