Thamnophis sirtalis (common garter snake): 106541431
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Entry
106541431 CDS
T06107
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106541431 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106541431 (GLI2)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
106541431 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
106541431
NCBI-ProteinID:
XP_013912354
UniProt:
A0A6I9X9S3
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
METSTSMASAKKEEKSVLLEDNGFSEPTKKPVPLAAAATAAVVTQGVPQHIFPAFHSPLP
IDMRHQEGRYHYEPHSLHAIHGPSTLSGSPVISDISLIRLSPHPAGPVDSPFSHPHPYMN
PHVEHYFRSMHSSPTLSMISAARGLSPADVAHEHLKERSLFGLPHPPPGASPADYYHQMA
FMASHPNPYGDLLMQSGATAGATHLHDYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDA
SIDLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGAISPAFTFPHPINPVTYQQILN
QQRGLSSAFGHTPPFLQPSPTFPARQHVAVISVNSSPAQISNSSNCIPESNQNKQSSESA
VSSTVNPVIHKRSKVKTETEILPPASPPTQELLTDLKEELDKDECKQEPEVIYETNCHWE
GCTKEYDMQEQLVHHINNDHIHGEKKEFVCRWQECTREQKPFKAQYMLVVHMRRHTGEKP
HKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK
PYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRNDIHLRPPVLKENNDNEASAKQ
SSRSTEERTEANSTTTGTEDSLQVKTIKTEKSVMYQSSPGGQSSCSSEPSPLGSINNNDS
GVEMNMHSGGSLGDLTVLEDNIPVVDSTVSSGNSTVSLQLRKNMTAMQRLEQLKKEKLRT
VKDSCSWANPAPQVKNSKLPPIPGNGCLLDNMHGTSTMLPNPRINELSISEITMLNQLAE
RRDSSTSTISSAYTVSRRSSGISPYFSSRRSSEASQFGNRPNNTSSADSYDPISTDASRR
SSDASQCNGVSGLLNLTPAQQYRLKARYAAATGGPPPTPLPNMERMTLRNKISLLDGSEP
ALPSFRLPPGPRRCSDSNAYVYGTSSAFSHEVPGNSARRASDPVRRPAGDPSSLPRIHTF
NSTNSMNLLHPHADRRQFNLPVFPYSDRSLARHVYSPRPPSISENIAMEAMPGETDGSVG
DDDIVLPDDVVQYIKSQNNGIATENSSTGYGSEMQNFQVNAKVQNNNALNQRRMAVPDLS
MNHSTSVGGGCQINYGANSNVHKNNMPVQWNEVSSGTVDVPSSQAKQPFPQRNLAVFHQK
QNFGQYQNFNQQQMPVGQNNINGNLQQFVQKNASMDGQRLNCMHLKQQQVNPGSDNNVDL
NSHEVFNQVHQMLSPNTMGGDVTQLSPSCNNMTMKPAFHVHSQQLDNAANPVSIVSNGRE
YVMHSQDMQEPGYQQSFSSQSSHMNFSMTQEDFHQASALITTNQPNFEPQQNTIGTVGQS
FTSSMVQPHPPPNPNPGNKHQGVRAGQQLGYVRISHPTNDVSSGQQRAHSSPRRTTGVGS
LQPQFNSNMREGHLMHYYGQIHMYEQNGNVNNQTDYNVRQQCALNTKPATMPSPGANQVS
STVDSQGLESPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPRNSLTLPAIP
AGISNMAIGDMNSMLTTLAEESKFLNMMS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatccacatcaatggcttctgcaaaaaaagaagagaaaagtgtccttctggaa
gacaatggctttagtgaaccaacgaagaaaccagttcctttagcagctgcagccacagca
gcagtggtgactcaaggagttccacagcacatttttccagccttccattctcctttgcca
attgacatgcgtcaccaagaaggaagataccattatgaacctcactcccttcatgcgatt
catggaccttccactctaagtggcagtcctgttatctccgatatctccctcatccgtctg
tcaccccaccctgcgggacctgtagactcacctttcagccaccctcatccatacatgaac
ccccatgtggagcattacttccgatccatgcacagcagcccaactctgtctatgatctca
gcggctagaggtctcagcccagctgatgtagctcatgagcatctaaaagagaggagtctc
tttggccttccccatcctcctccaggagccagccctgcagactactatcaccagatggcg
ttcatggccagccacccgaatccttatggggacctcctcatgcagagtggagcaacagcc
ggggccacgcatcttcatgattacctcagccctgtagatgtgtcaagattctccagcccc
agagtaacgccaagactcagcaggaagcgagcgctttctatatcccccttgtctgatgcc
agcattgatctccagaccatgattcggacttcacccaattccctggtcgcttatatcaat
aattccagaagtagttcggccgctagtggctcatacggccatttatcagcaggggcaata
agtcctgcctttaccttccctcatccaatcaacccagtgacataccaacaaattctgaac
cagcaaagaggcctgagctcagcatttggacatacccctccttttctacagccatctcca
actttccctgcccggcaacatgtagctgtcatctcggtcaactcttctcctgctcagatc
agcaacagtagcaactgcatccctgagtccaaccagaacaagcaaagcagtgaatcggcc
gttagcagcacagtcaatccggtaattcataaacgcagtaaagtcaagactgaaacagag
attctaccaccagcttctccaccgactcaggaacttctgacagacttgaaagaagaactt
gataaggacgaatgcaagcaggagcctgaagttatttatgagaccaactgtcactgggaa
ggttgtacaaaggagtatgatatgcaggagcagctggtccaccacatcaacaatgatcat
attcatggggaaaagaaggaatttgtttgtcgctggcaggaatgtacccgggaacagaag
cctttcaaagcacaatacatgttagtggtgcacatgcgaaggcatactggagaaaaaccc
cacaagtgcacgtttgaaggttgctccaaagcctattcgcggctagagaacttaaagaca
cacctgaggtcacatacaggagaaaaaccttatgtctgtgaacacgagggctgcaataag
gccttttccaatgcttccgatcgagcaaaacaccagaacagaacacattccaatgagaaa
ccctatgtctgcaagatcccaggctgcaccaagagatacacagaccccagctctctcagg
aaacacgtgaagacagtgcatggaccagaagcccatgtcaccaaaaagcaacgcaatgac
attcatctgaggccacctgtccttaaggaaaacaatgacaatgaagcaagtgccaagcag
agcagccggtctactgaagaacggactgaggcaaacagcaccaccacaggcacagaggac
agtttacaagtcaaaacgataaagacagagaagtctgtgatgtatcagtccagtcctggt
ggccaatcatcatgcagcagtgaaccatcaccccttgggagcatcaacaacaatgacagt
ggagtggaaatgaacatgcacagtgggggaagtctgggggacctgactgtgttggaggat
aatattcctgttgtggactcgacagtctcatctggcaactcaactgtcagtcttcaacta
aggaaaaacatgacagcaatgcaacgccttgagcagctcaagaaagagaaactcaggaca
gtgaaggattcttgctcatgggcaaatccagcaccacaagtcaaaaacagcaagctgcct
cccatcccaggcaatggttgtctgctggacaatatgcatggcacctctacaatgctgcct
aacccaaggataaatgagctgtccatcagtgaaattaccatgttaaaccaactagctgaa
cgccgtgacagctcaaccagtaccatcagttctgcctacacagtcagccgcagatcatca
ggaatatccccttacttctccagccgccgttccagtgaagcttctcaatttggaaatcgt
cctaacaacacaagctctgctgactcctatgatcccatttccacagatgcttctcgcagg
tcaagtgatgccagtcaatgtaacggagtctctggtctcctgaatctcacaccagctcag
caatacaggctgaaagctaggtatgctgctgccacaggtggcccaccacctacaccacta
cctaacatggaaagaatgaccctgaggaataaaatatctctccttgatggttcagagcct
gctttgccttcatttcgtctccctccagggccaaggcgttgtagtgacagcaatgcttat
gtgtatgggacatcgtctgcattctctcatgaagtgcctgggaatagtgcaagacgggca
agtgatccagtgaggaggcctgctggggacccaagttcccttcctagaatccatactttc
aatagcaccaacagtatgaatctccttcaccctcatgcagacagaagacaattcaacctt
ccagtctttccatattcagataggagccttgctaggcatgtgtactccccacgaccccca
agtattagtgaaaatattgccatggaagcaatgccaggcgagacggatggttctgtggga
gatgacgatattgtcctacctgatgatgtggtgcaatacatcaaatcccaaaataatggg
attgccacagagaactcctctacagggtacggcagtgaaatgcaaaacttccaagtaaac
gcaaaagtgcaaaataacaatgcattaaaccagcgcagaatggctgttcccgatctgagt
atgaaccattcaacctctgttggtggcggatgccaaataaactatggagctaactctaac
gtgcataaaaataacatgccagtccagtggaatgaagttagctcaggaactgttgatgta
ccctcctctcaagcaaaacagccattccctcagcggaacctggctgtattccatcagaag
caaaattttggtcagtatcagaacttcaaccaacagcagatgccagtaggccaaaacaac
ataaatgggaatctgcagcaatttgtgcagaaaaatgccagcatggatggacaaaggctc
aattgcatgcacttaaagcagcagcaggtgaatccaggttctgataacaacgtagacctg
aactcccatgaggtgttcaaccaagttcatcaaatgctaagtccaaatacgatgggtggt
gatgtcacccaactttctccttcttgtaataacatgaccatgaagcctgcattccacgtt
cattctcagcaattagataacgcggctaatcccgtttcaatagttagcaatggcagagaa
tatgtaatgcacagtcaagacatgcaggaaccagggtatcagcagagcttttcatctcag
tcaagccatatgaacttctccatgacacaagaggatttccaccaagcttctgcattaata
accacaaatcaaccaaactttgagccacaacagaatacaattggtaccgttggacagagc
ttcacttcctcaatggtacaacctcaccctccacctaatcctaatccaggaaacaagcac
caaggagtccgtgctgggcagcagttgggatatgtgagaatatctcaccctacaaatgat
gtgagttcagggcagcaaagggcacactcttcccccaggagaacaactggtgtaggatcg
ttacaaccacaatttaacagtaatatgagggaaggccatttgatgcactattatggtcaa
atacatatgtatgaacaaaatgggaatgtcaacaaccaaacagattacaatgtcagacaa
caatgtgcgctgaacaccaaaccagccaccatgccttcccctggtgctaaccaagtttct
agcacagtggattctcagggtctggaatctcctcagatagattttgatgctatcatggat
gatggcgaccattcaagtctgatgtcaggaaccttgagccctagcatcctacagaatctc
tctcagaactcttctcgccttactactccccgaaattctctgacactgccagctatacca
gctggaattagtaacatggcaataggggacatgaattctatgctgactaccctggcagaa
gagagcaaatttcttaacatgatgtcttaa
DBGET
integrated database retrieval system
