Thamnophis sirtalis (common garter snake): 106541882
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Entry
106541882 CDS
T06107
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106541882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106541882
04121 Ubiquitin system [BR:
tsr04121
]
106541882
Membrane trafficking [BR:
tsr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
106541882
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106541882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR41
DSE1_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
ASA1
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_RIG_1st
F-box
CFAP251_N
TRM82_WD
Beta-prop_ACSF4
Beta-prop_NOL10_N
Beta-prop_Aladin
WDR90_beta-prop_4th
PAC11
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Ge1_WD40
PQQ_2
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
Beta-prop_NWD2_C
KNTC1_N
CDtoxinA
PALB2_WD40
Beta-prop_pof12
Beta-prop_WDR19_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
106541882
NCBI-ProteinID:
XP_013912917
UniProt:
A0A6I9XGB7
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MKRKSEGGAPEGRAQSPGKKLCKSSEPGRMLGPCIARPASTFGDLRNAKASQARCRHVPP
VAPPLELQDWLRTFQRWSGPEKLLALDELIDRCEPPQIKHMMQVIEPQFQRDFISLLPKE
LALYVLSFLEPRDLLRAAQTCRYWRILAEDNLLWREKCRDGGIDEPLSLRKRRLLSPGFM
YSPWKLAFLRQHRIDMNWRNGDARPPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWS
AITGECVQTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNADTGECVHTLYGHTSTVRCM
HLHDTRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVRCVQYDGHKVVSGAYDYTVKVWD
PETESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRVWDAESGNCLHTLMGHQSLTSGM
ELRDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVVTSSDDGTVK
LWDLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDLK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaagtcggagggcggggcccccgagggcagagctcagtccccggggaagaag
ctctgcaaaagttccgagccgggcaggatgctgggtccctgcatcgcccggcctgcgtcc
acttttggggatctccggaatgccaaggccagccaggcgcgatgccggcacgtccccccc
gtggctccgccccttgagctgcaggactggttacgcactttccagcgctggagcggcccg
gagaagctgctggccctggacgagctcattgaccgctgtgagccccctcagattaagcac
atgatgcaggtgatcgagccccagttccagcgggacttcatctcgcttctgccaaaggag
ctggctctctatgtcctctccttcctggagcctcgggacctgctccgagctgcgcagaca
tgtcgctactggcgcattctggctgaagacaacctgctctggcgggagaagtgccgcgat
ggaggtatcgatgagccactgagcctgcgtaagcgtcggctgctgagcccgggcttcatg
tacagcccttggaagctggcctttctacggcagcatcgcatcgatatgaactggcgcaat
ggagatgcccgcccccccaaggtcctcaaaggccacgatgaccacgtcatcacctgcctc
cagttctgtggcaaccgcatcgtcagtggctctgatgacaacacactcaaggtttggtct
gccatcaccggcgagtgtgtgcaaactctggtaggacacaccggtggtgtttggtcctcc
cagatgagggacaatatcatcatcagtggctctacagaccggaccttgaaagtgtggaac
gcggacacgggtgaatgtgtgcatacgctctacggccacacctcgactgtgcgttgcatg
cacctccacgacacaagggtggtgagtggctctcgcgacgccactctccgtctttgggat
atagagaccgggcagtgcctccatgtgctgatgggacatgtggctgctgtgcgctgcgtc
cagtatgatgggcataaggtggtgagcggggcctacgactacacagtaaaagtctgggat
ccggagacagagagctgcacccacactctgcaaggccacaccaaccgggtctactccctg
cagttcgatggcacccacattgtgagcggctctctggacacctcaatccgcgtatgggat
gccgagagtggcaactgcttgcacaccctgatggggcaccagtccctcaccagcggcatg
gagttgcgggacaatatcctcgtctctggcaatgccgactccaccgtgaaaatttgggat
atcaaaacgggacagtgcttgcagaccctccaagggcccagtaagcaccagagtgcagtc
acctgcctgcagttcagttccaagtttgtcgtgaccagctcagatgatggcacagtcaag
ctgtgggatctcaagacgggggaatttgtgcgcaacctggttgccctggaaagtgggggc
agtgggggagtcgtctggcgcatccgtgcctccaacaccaagcttgtgtgtgctgtgggc
agccgcaacggcactgaagaaaccaagctgctggtgctggactttgatgtggacctgaaa
taa
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integrated database retrieval system
