Thamnophis sirtalis (common garter snake): 106542680
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Entry
106542680 CDS
T06107
Name
(RefSeq) rho guanine nucleotide exchange factor 1-like
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04270
Vascular smooth muscle contraction
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106542680
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106542680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106542680
Membrane trafficking [BR:
tsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106542680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
YfdX
Motif
Other DBs
NCBI-GeneID:
106542680
NCBI-ProteinID:
XP_013913954
UniProt:
A0A6I9XE86
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MELEEGYNGSSALGAQGGVAMSIIGAEDEDFENDIEPFQHPDAQTSLFQNLEILMKHPAY
LMVFIQHVVLQFDSSPVLCYLHVDLILNRLGPKEAKKQFVDFCHVFLDKTGLLRVPIPTV
VQFELDRNRPDLIPEDQLKKYLQDIQAFQEVEISQQLEDFREKRKMGMTPGEKELFELEG
YRTKDKGIREAKEKQLAEQLLVKLEEMHLTISTDEEKSSAIYTAIVTYMKHLGVKAKTAD
NKKSKANFFRKKISGTKKPEEAIKSRKGFSILDPARWNRGDSHSAEKTPALDKKAKLSEG
TSGRSKGNPFVQDPSSVSVTVHPPPGESNDGEQGLDSPTLGADSGDSPVTEQALAGEQLP
LEESTENERRRKRLTGKLGRSESLRVYERKRSQRGSAKGKQPRSRSDVDIEAAARANELE
GKPTLEQARQKQGSRNLEPGGAGGGEPPPSFLLPQSEEFEPRVSELELDPPNWRELVPPD
TLLRLKKSEVKRQEVINELFITEHAHLRMLRVLLEVFYQPLLTEGFFTESELVNIFPSLE
DLIDEHKVFLENMKRLREENNLIVSEIGSTLLARFDGSEGNWFQKISSRFCSRQSFALEQ
LKAKQKKEARFNQFIQEAESKPRCRRLQLKDIIPIEMQRLTKYPLLLHSIAKCTEEAEER
QKVEKAAECCRQILNHVNQEVRVMENLLKLKDYQRRLDLSNLKQSTDPLLSEFRVSPNAV
GTEEAMTVNELPF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagttagaggagggttacaatgggagttcagccctgggagctcaggggggcgtggct
atgtccatcattggtgcggaagatgaggattttgaaaatgacattgaacctttccagcac
ccggatgctcaaaccagcttgttccaaaacctggagattctgatgaagcaccctgcatac
ttaatggttttcatacaacatgtggtgctccagtttgattcaagccctgtgctctgttac
ctgcacgtggacctcatcctaaaccgccttgggcccaaggaagccaagaagcaatttgtg
gatttttgccatgtcttcttagacaaaactgggctgctgagagtccctataccaactgtt
gtgcagtttgaactggaccgaaacagacccgatctcatcccggaagatcaattgaaaaaa
tatttgcaggacatccaagcttttcaagaagtggagatatcccagcagctggaggacttc
agggaaaagaggaaaatgggaatgaccccgggagagaaggagcttttcgaactcgagggc
tatcggaccaaagacaaaggcatcagagaggccaaagagaaacagctggccgaacagctg
ctggtcaaactggaggagatgcacctcaccatttctaccgacgaggaaaaaagctctgcc
atatataccgccattgtcacgtatatgaagcatctgggggttaaggccaagacagctgat
aacaagaaatcaaaagcaaactttttccgcaaaaagatttctgggaccaagaaaccagag
gaagccatcaagtcaaggaaaggcttcagcattttggacccggcccgctggaaccgtggg
gattcccattcagctgagaagaccccagccttggacaaaaaagccaagttatcagaagga
acctccgggcgtagcaaagggaaccctttcgtgcaggatccctccagtgtgtccgtcact
gtgcaccccccacctggagagagcaatgacggggagcaggggttggacagcccaactctc
ggagctgattcaggagattcgccggtcactgagcaagctttggctggagaacagctcccg
ctggaagaaagcacagagaatgaaagaaggcgaaaaaggctgacagggaagttgggccgc
tcggagagcctgcgggtttacgagcggaagcggtctcagcgaggctcggccaaaggcaaa
cagccgcgttcgcggagcgatgtggacatcgaagccgcggcccgggccaacgagctggaa
ggaaaaccaaccctagaacaggctcggcagaagcagggaagccgcaatttggaacccgga
ggggctgggggaggtgagcccccgccgtcctttctgcttccccagtctgaggagtttgag
ccgcgtgtttcggaactggaactggacccgccaaactggcgggagcttgtcccccccgac
accctcctcaggctgaagaaaagtgaagtgaagcggcaagaagtgatcaacgagctattt
atcacagagcacgcccacctgcggatgctccgtgtgttacttgaggtgttctaccaaccg
ttgttgaccgagggattcttcaccgagagcgaactggtgaacattttccccagcctggaa
gacttgatcgacgaacacaaagtgtttctggagaacatgaagaggctgagagaggagaat
aatttgattgtctccgaaattggaagcactctcctggctagattcgatgggtctgaagga
aactggtttcagaagatctcctcccggttctgtagccgccagtcttttgcgttagaacag
ctgaaggcgaagcagaagaaagaagctcgtttcaatcagttcatccaggaagcagaaagc
aaaccccgatgtcggcgattacaattgaaggacatcattcctattgagatgcagaggcta
accaagtatccgctgttgctccactctattgccaaatgcactgaggaagctgaggaacgt
cagaaggtggagaaggcggctgagtgttgccgtcagatcctcaatcacgtcaaccaagaa
gtgcgtgttatggagaacttactgaaactgaaggattatcagcgacgtttggatctctcc
aatcttaaacagagcacagatcctctgctgagtgaatttcgggtgagtcccaacgcagtg
gggacagaggaagccatgacagtaaatgaattgcccttttaa
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