Thamnophis sirtalis (common garter snake): 106543170
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Entry
106543170 CDS
T06107
Symbol
SPEN
Name
(RefSeq) msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106543170 (SPEN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106543170 (SPEN)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106543170 (SPEN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINT_MID
MINT_RID
SPOC
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
106543170
NCBI-ProteinID:
XP_013914564
UniProt:
A0A6I9XFX3
LinkDB
All DBs
Position
Unknown
AA seq
3118 aa
AA seq
DB search
MQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHELCTVFQRFGG
IVDIDIKKVNGIPQYAFLQFSDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDG
LATSLTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVNETKGRKISGNKVK
VDFANRESQLSFYKSMEKTGQDIREFYEMLTERRDERRGSYDYAADRTYYEAVRTPGTYP
EDPRRDYPARGRDFYADWDPYQGDYYDPRYYDDPREYRDYRGDTYKQDIREYSYRQRERF
ESDREHERRPLERSQSPAHSRRPQSPSASPSQSERLQSDSERRIYSRSSEHSGSCSSLSP
PRYDKLDKSRLERYAKNEKPEKERVFEQERPEKDKRLVRKEKPEKLEKEKTEKQKRKAKV
HSPSSPSSETDPENEREPSPEKPKGSSKQSRERAEREGAAKNRLDLMPCVVLTRVREKEG
KVLDQPPLEKLRGKQESDPIKPPLPDQKMQISQVDQTKLELLKLDSIRAKVPKEKVLASH
IEVVDKDGKLKPKKHLKADPSSEVAYPVDLEKLEARKRRFAEANLKSDKQKMEIKRSSQE
EEEGRVVLKKQMDVAETERKPPRKEAIKRETRKIKLERFTTVASPKDATEPASLLVGLAS
RPVLELQVRLGEAADEPLEAFEISPQRVNSIKLQHKHALLIDEQGAERDEIWKNYCGLPE
EVCDRKGAQEKPPSSDAEEKIPIDIDHTQSYRKQMELSRRLKQQMEMESAKHEKFGSPKR
DLDDFERRSLVHEVGKPPQDVTDDSPPSKRKKSCEAFEFEISTKRERNYRSSRQVSEDSE
RTAISPALRPFPFHEEEEVLDSPRLIPFKEAKESPIMEEKGPPYSNVPMMEEALKFNPYD
SSRREHVVEIAKVKTSAVTSEEESTRLDSHVKQEPGRVDISFPSSIVKRDSIRKRSIRDL
EPGEVPSDSEEEGDSKPHSPRPSSFPEGSRLSFLLRDREEKLRDREERLTTSLERNKFYS
FALDKTITPDTKALLERAKSLSSSREENWSFLDWDSRFASFRNNKDKEKVDSAPRPIPSW
YMKKKKIRPDSEGKLDDKKEDHKEDEQERQELFASRFLHSSIFEQDSKRLQHLEKKDEEL
DFLSGRLYSRQASLDGTNSISDFMPEPVVLFHSRFMELTRMQQKEKEKDQKPKEAEKQED
KENRPKTPEAKSEHHEPEYKSPILVGPSPAAHMPPEPLPLFPEKAGSEKPLMEGIPPLRE
EKPLEPGPAVFEGFKALPEDLLPVKADPPEYLEVPPMADHSKDVALSVATPVEDTKVLEN
HSCLDTKPPTPGSSFSQAALGAEPEAELGSLPHKLASKSEVLLEPKEDLFPPSVIVESGV
GQKAEALAEVLPTVSDTEMEAEPPVVAKDKKLYKNRRSKTPVQSIVASVAEKPATRKSER
IDREKLKRSGSPRGETLKLLELKVETEKGSRNAAKSPSAAVVAEPENPEPSLPVGRTRRR
NVRSVYATTGDHDLPSSIKEAVEVTRPTRKRIEREPPDPATIPTPPRRGRPPKARRKPEE
EVSPVKVEPALSQEAEEAEGKETVDIPKPVEGWRSPRSQKLLHSQTLVAKKGKNEPKIEA
SPESEESLDPPSQGLHISENCGKLKTEKETIPHEPKRDRKEVEMSKNTSEGCPVEIVDRK
FIPDKATKPKRGRSRSIKAVDKASLIKSLKNVEIRLNVDEVKGALRPSEEEGELLSPFPA
KSKSPLKEDKLSPQLPKTEAEDALQDTKKEAPCESAQPPEADQLAKQIELEQAVENIAKL
TESPTIAAYKEQQAAEVSDVRQDEEGDKPAHQASETELAAAIGSIINDITVEGEGFAAPP
TYPSESEADLPTEPLVLPSAREDMEPETDQAVSNILETEAASGETPGPGSAAETESKEAE
VSLSESSNSAQEAETSQEAEGSRKERGRQKSARLRRKRSTSKKVDMAEFRTLEPERARSK
SPGVPEVTGIPEGAMSDDSQGKAFPSAAPSRLVIPQASVAGSPEAASQDSLTERGPSPSD
GLLPSIPVDEGGQGRFRLRPVAEKLPVPPPDGLPSAPLQTAPTASALKLPPAVQAGVVPL
HPNTTKVTEWIVKHEEARSRSTPPPALPPDTKASDIDPNSSTLRKILMEPKYVPATGVAT
STHVTTAIVEPVSTSRAEEAPPRPPVEVSRPCLEEKSPVPTANNLELPVAEAPILAEKEK
AVAVLAPKATSVISRMPHSIDLEETPRITLVKQVSQPQTCLVTAVSPKYKQRPSPNDNSR
FHPGSMAVIEDRPVETGSSPGLRVNTSEGVVLLSYSGQKTEGSQRIIAKISQIPPASAVD
IEFQQSVSKSQIKQESLVPSQSMPKGSPAPVGYGSTSSPALVLGGQQYSPSPVLPSVKPE
RSSSSSEKSDSVQAATAQSCPIKVLSSQSANTPSILVHNQLVLSQTIASSTKKLPDPTSL
KGESKPHQPSNLSPGVGPHHSSLSGKLYPEANHVSSGPGGPADRPVPHLGVAKQEPLSPR
TSGHSPSPFPRACHPGGPASPALSGNNSMMGLQGSPCPGIPMPQYISSMHPEQSVIMPPH
SVTQTVSLGHLSQGEVRMNTPPLPGLPYNLRPEALHSPRAPLQPQRSSTPQPAPIREMVM
PPLSSQHASEEEMHYHHPACRGSAPVQSDVLVMQPDYRVHPAGIRLDQYNVPRDMRVMMH
SHMAGVGSEHHPEPRQSRTPEGRSVKTPPSTKASKETPKASEVKMAHSPHSESRLLSGQL
PGLPLTQPVVVPHGVQMMHPSGTTFHDYRPVYGDMRSYHPAAQLGHPPFSGGSPIGLPSR
SMTPSQGLPEGEHSHPNQPAHSKTPQISQEPKGAQATGPDPSLHSVVNRHVQQMDPHLHP
SQTTSYPSPVAASVKQELPSSHQAQVPKSALFIPTTAGPGAAPGLTLARSESQSALKQDS
AGHPVAQRPVDMVQLLTKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPAPEGGPP
LRIAQRMRLEAPQLDGVARRMMVESDYCLLLALPCGRDQEDVVNQTDSLKAAFISYLQAK
QAAGIINVPNPGSNQPAYVLQIFPPCDFSESHLSRLAPDLLASISNISPHLMIVIAAV
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagtgacggcttggatagggccagaaaccgaaagcgagaacgaattccgg
ccactggatgaaaggatcgacgagtttcaccctaaagcaactagaactctcttcattggc
aaccttgaaaaaaccaccacatatcatgagctttgtaccgttttccagcgttttggagga
atagtggatatcgacattaagaaagtgaacgggattcctcagtatgccttcctgcagttc
tccgatattgccagtgtctgcaaagccatcaaaaagatggatggagaatatcttggaaac
aatcgcctcaagctgggctttggaaagagcatgcctaccaactgcgtgtggctggacgga
ctagcgacaagcctcacggatcagtatttgacgcgacatttttgccgctacggcccagtg
gtgaaggtggtgtttgatcgcttaaaaggcatggctttggttctctacaatgagatagaa
tatgcacaggcagctgtcaacgagaccaaggggaggaaaatcagcgggaataaagttaag
gtggattttgcgaaccgcgagagccaactgtcattctataagtctatggagaaaacgggt
caggacattcgagaattctacgaaatgcttacagaaagaagggatgaaaggagaggctcc
tatgattatgctgcagatcgtacctattacgaggccgtccggacgccggggacatatcca
gaagaccctcggagggattacccagctcgaggcagggacttttacgccgattgggatcct
taccagggagactattatgacccccggtattacgatgacccccgggaatatcgagactac
aggggagacacttacaagcaagacatcagggagtacagctaccgacagcgtgagcgattt
gagtctgaccgagagcacgaaaggaggcccttggaaaggagccaaagccccgctcactcc
cggcggccgcagagccccagcgcctccccctcgcaatcagagcggctccagagtgactcc
gagaggcggatctacagtcgctcgtctgagcacagtggaagctgcagctccctttctcca
ccccgctacgacaaactggacaaaagccgtcttgagcgatacgccaaaaacgaaaaaccc
gaaaaagaacgtgttttcgaacaagagcggccggagaaggacaagcgcctggtgaggaaa
gagaagccggagaagcttgaaaaagagaaaacggagaagcagaagcgcaaggccaaagtg
cattctcccagctccccgtcttcggaaactgacccggaaaatgaaagggagcccagtccc
gagaaaccaaaaggcagcagcaagcagagccgggaaagagccgagagggagggagctgcc
aagaaccgcctggatctcatgccatgcgtggtgctgacccgagtgagagaaaaggaaggg
aaggtcctcgaccagcctccgctggagaaattaagagggaagcaggagagtgaccccatc
aaacctcctttgcctgatcagaaaatgcagatttcccaagtggatcagaccaagttggaa
ctgctgaagctcgactccatcagagccaaagtgcccaaagagaaggtcctggccagccac
attgaggtggtggacaaagatgggaagctgaagcctaagaagcacctgaaggcagatcca
tccagtgaagtggcctatccggtggatctcgaaaagctggaggctcgcaaaagacgtttc
gcggaggcaaacctaaaatccgacaagcaaaaaatggaaatcaaaagaagcagtcaggag
gaagaggaaggccgggtcgttttgaaaaagcagatggatgtggctgaaaccgaaaggaag
cccccgagaaaagaggccattaaaagagaaactaggaaaatcaagctggaaagatttact
accgtggccagtcccaaagatgctacagagcccgccagccttttggtaggccttgcttca
cggcccgttctagaactccaggttaggctgggggaagcggccgatgagcccctagaggcc
tttgagatctcaccccaaagggtcaattccataaaactgcagcacaaacatgcgctcctg
atagatgagcaaggagcagaaagggatgagatttggaaaaactactgcggtcttcctgag
gaagtgtgtgaccgtaaaggggcccaggaaaagccaccttcctcagacgcagaagagaaa
atccctattgatatagatcacacccagagctaccgaaaacaaatggagctaagtcggcgg
ttgaagcagcaaatggaaatggagtccgccaaacacgagaagttcggcagccccaaaagg
gatctggatgactttgagcggcgcagtctggtgcacgaagtggggaagcccccacaagac
gtgacggacgactcccccccaagtaagcggaagaaatcctgcgaggcctttgagtttgag
atcagcaccaagcgggagagaaactaccgaagctcccgccaggtgagcgaggattccgag
agaaccgccatttctcctgccctgagacctttcccattccatgaggaggaagaagtgctg
gattccccaaggctgatccctttcaaagaagctaaagaatcccctataatggaagaaaag
gggcctccatattcaaatgtgcccatgatggaagaggccttgaaatttaacccttacgac
tctagtagaagggagcatgtggtagagattgctaaagtaaaaacatctgccgtaacctct
gaggaggaatcaacccgattggactctcatgtgaagcaagaacctgggcgggtggacatt
agcttcccaagtagcattgtcaagcgtgacagtatccgaaagcgatccatccgggatctg
gaaccaggggaggtgccctctgactcagaggaggagggcgactcgaagccccactctcct
aggccctcttctttcccagagggctccaggctgtcttttttattacgagacagggaagag
aaactacgtgacagagaggagcggttgacaacttccttagagaggaataaattttactct
ttcgctttggacaagacaatcaccccagatacaaaagccttgctcgagagggccaagtcc
ctctcttcatcaagagaggaaaactggtcttttctcgactgggattccagatttgccagt
tttagaaacaacaaggacaaagagaaagtggactccgcaccgaggccgattccctcatgg
tatatgaaaaagaaaaaaatcaggccggactcagaagggaagttagatgacaagaaggag
gatcacaaagaagacgaacaggaaaggcaggagctcttcgcttctcgttttttgcacagc
tccatttttgaacaggattctaagcgtctgcagcacttggaaaagaaagatgaagagctc
gacttcctttccggccggttgtacagcagacaagcgtctctcgatgggaccaacagcata
tcggatttcatgccggaacccgtggttctcttccacagtaggttcatggagctcacccga
atgcagcaaaaggagaaggaaaaagaccagaagcccaaagaagctgaaaaacaggaagac
aaggaaaacaggcccaagactcctgaagccaagtctgagcatcatgagccagagtataaa
tcacccatccttgtgggaccctcgccagctgcccacatgccccccgagcccctgcctctt
ttcccagagaaagccgggagtgagaaacccctcatggaagggattcctcctttgagggaa
gaaaagcccctggagcctggacctgcagtgttcgaagggttcaaggcccttccggaagac
cttctgcctgttaaagctgatccccccgagtacctcgaagtccctcccatggcagatcac
agcaaagatgttgccctttccgtggcaactcccgtggaagacaccaaagtccttgaaaac
cattcctgtttggacaccaaaccacccacccccggctcttccttctcccaagcggctctc
ggggcagagccagaagctgaactgggctcgctgccgcacaaattggcatctaaatctgag
gtgctgctcgaacctaaagaagaccttttccctccgtccgttatcgtggagtctggagtg
ggccagaaagccgaagccctggctgaggtcctgcctaccgtttccgatacagagatggaa
gccgagcctcctgtggttgcgaaagacaaaaagttgtataaaaacagacgttcgaaaacc
cccgttcagtcgatagtggccagcgtggcagagaagccggccacaaggaagagcgaaagg
atcgatcgagagaagctgaaacgctccggctccccccggggggaaacactgaagctcctg
gaactgaaggtggaaacggagaagggctcaaggaatgcggctaagtctccaagtgctgca
gtggtggcagagccagaaaacccggagcccagtttgccggtaggccgaaccaggcgcaga
aatgtgaggtctgtttatgcgaccacaggggatcacgacctgccatcgtctattaaagag
gccgtagaagtcaccaggccaaccaggaaaagaattgaacgagaacccccagacccagca
actattcccactcctcccagaagaggccgacctcccaaggcacgccgcaaacccgaggaa
gaggtctctcctgtcaaggttgaaccagcattgtcacaggaggcagaagaagccgaaggg
aaggagacagtagacatcccaaagccagtggaggggtggcgctcacccagatcacagaaa
ctgctccacagccagacgctggtggctaaaaaggggaagaacgagcctaagatagaggca
tccccggagtccgaggagtctcttgatccccccagtcaagggctgcacatcagcgagaac
tgtggcaagctcaagacagagaaggagacgatcccacacgagccaaagcgagaccggaag
gaagtggagatgtctaaaaatacctccgaaggctgccctgttgaaattgtggacaggaaa
tttattccagataaagctaccaaacccaaaaggggacggtccaggagcataaaggctgtc
gataaagcatctctgattaaaagtcttaaaaacgttgagatccgtcttaatgtggacgaa
gtgaaaggggcgctgcggcccagcgaggaggaaggggagctcttgtcccccttcccagcc
aaaagtaaaagccccctgaaagaagacaagctctctccacagctcccaaagaccgaggct
gaagacgctctccaggacaccaagaaagaagccccctgcgaatcggcccagcctcccgag
gccgaccagctagctaagcagattgaactcgaacaagcagtggagaacatcgccaagctg
acagaaagcccaacaattgcagcctacaaggaacagcaggcggctgaggtgtctgatgtt
cgccaggatgaagagggggataagcccgcccaccaggccagcgaaacagagctggcggct
gccatagggtccattatcaatgacatcactgttgagggagaaggctttgcagctccaccc
acatatccttctgagtccgaggctgacctgcccaccgagcccttggtgttgccttctgca
cgagaggacatggagcccgagacggaccaggcagtcagcaatatcttagaaacagaagct
gcttcaggggagacgccgggccccggctcagccgcagagacagaaagcaaagaagctgaa
gtcagcctaagtgaatcctccaattctgcccaggaggcagaaacctcccaggaggcggaa
ggctctcggaaggagcgcggacgccagaagtctgcacggctcaggcgcaaaagaagcacc
agcaagaaagtggacatggcggaatttaggacgcttgagcctgaaagagcccggagcaaa
tcccctggtgtcccagaagtaacagggatccctgaaggggccatgtcagatgacagccag
ggaaaagccttcccttcggcagccccctcccgcctagtaattccccaggcaagcgtggct
ggatccccagaggcagcttcgcaggactcccttactgagagggggcccagtccctcagat
ggcttgctgccctccattcctgtggacgagggaggtcagggcagattcagactgaggccg
gtggccgaaaaacttcccgttccccctccagatggcctcccaagtgcacctctgcaaaca
gctcctactgcgtctgcactgaagcttccccccgcggtccaggctggcgtggtccctctg
catcccaacaccacgaaggtgaccgaatggattgtgaagcatgaagaggctcggtcccgc
tccaccccaccaccagctcttccccctgacacaaaagcatcggacatcgaccccaactcc
agcactttgcgcaagatcctgatggagcccaagtacgtgcccgccactggagtggccacc
tccacgcatgtcaccacagctatagttgaacccgtaagcacctctcgtgcagaggaagcg
ccccctcgccctccagtagaggtctccaggccatgtctagaagagaagtctcccgttcct
actgcgaacaacttggaactgccggttgcagaggcccccattttggccgagaaagagaag
gcggtggctgtcctggcccccaaggcgacttctgtgatcagcaggatgccccacagcatt
gaccttgaggagacccccagaatcaccctggtgaaacaagtctcccagccccagacatgc
ctggtcactgccgtttcccccaaatacaagcagaggcccagtcccaatgacaacagccgg
ttccacccaggctccatggctgtgattgaggaccggccagtggaaacgggctctagccca
ggccttcgtgtcaacacttctgaaggtgtggtgctcctgagctattcgggacagaagaca
gaaggctcccagcggatcattgcaaaaattagtcagattcccccagctagtgcagtggac
attgaatttcagcagtctgtgtccaaatcccagattaagcaggagtccctcgttccctct
cagtcgatgccaaagggctcccccgcacctgtgggttacgggagcacctcctccccagcc
ttggtcctgggaggccagcagtacagtccttcccctgtgcttccctccgtcaagccagag
cgcagcagcagtagctcggaaaagtctgattctgtccaggcagctactgcccagtcatgc
ccaattaaagtgctttcctcccagtccgccaacactccctccatcctggtgcataaccag
ctggtcctctctcaaaccattgcctcttccactaagaagcttccggatcccacgtctctg
aaaggggagagcaaaccccatcagccctccaacctgagccctggggtgggtcctcaccat
tcttccttgtctggcaagttgtacccggaggccaaccacgtgagcagcgggccaggaggt
cctgccgacagacccgtgcctcacttgggggtggccaagcaggagccgctctccccccgc
accagcggccactccccatctcccttcccgagagcttgtcaccctgggggccctgcttcc
cctgcgttgtcggggaacaactccatgatggggcttcaaggctccccttgtccagggatc
cccatgccccagtacatctccagcatgcacccggagcaatcagtgatcatgcccccgcat
agcgtgactcagacggtgtccctgggccacctctcccagggggaagtacgcatgaatacc
cctccactgccagggcttccctacaacctccgccccgaggccctgcactcgcccagggcc
cctctgcagccacagcgctccagcactccccagccagcccccatcagggagatggtcatg
ccgcctctgtcttcccagcatgcctccgaagaagagatgcactaccaccacccggcgtgc
cggggttcggcccctgtgcagtccgatgtgctagtcatgcagccagactaccgtgtgcat
ccagcaggcatccggcttgaccagtacaacgtgcctcgggacatgagagtcatgatgcac
tcgcacatggccggagtgggcagcgaacatcacccagagccgcggcagtccagaacgcca
gaagggagatccgtgaaaacgccgccgtccaccaaggcaagcaaagagacgcccaaagcc
tctgaggtcaagatggcccactcaccccacagcgaatcccggctcctcagcggccagctc
ccaggactgccattgacacaaccagtggtggtgcctcatggggtgcagatgatgcatccc
agcgggaccaccttccatgattatcggccggtgtacggtgacatgcgaagctaccatcca
gcagctcagcttggccaccctccgttttctgggggatcaccgatcgggcttccttcccgg
agcatgaccccctcccagggtctgcctgaaggggaacattcgcaccccaaccagccagct
cacagcaaaacccctcagatctcccaagagccaaaaggagcccaggcgacagggccagac
ccttccctccactcagtggtcaacagacacgtccagcagatggatccccacttgcacccg
agccagaccacctcctacccttctcccgtcgccgcatcagtgaagcaggagctcccatct
tcccatcaggctcaagttccaaagtcggccctctttattccaactactgctggtcctggg
gcagctccaggactgaccttagcccggtccgaatcgcagtcagccttgaagcaggactct
gctggtcatccggttgcccaaagaccagtggacatggtccagctgctgacgaaatacccc
atcgtgtggcaggggctgctggctttgaagaacgatactgcagctgtccagctgcacttt
gtttccgggaacaacgtcttggcgcaccgctccttgccagccccggagggtggccctccc
ttgaggattgcccagcggatgaggttggaagcgccacagctggatggggtggcccgccgg
atgatggtggagagtgactactgcctgctgctggctctgccttgtggccgagaccaagaa
gacgtggtgaaccagaccgactcgctcaaggcagcctttattagctaccttcaggccaag
caagctgccggcatcatcaatgttcccaaccccggctcaaaccagcctgcgtacgtcctc
cagatcttcccaccttgtgacttctccgagagccatctctcccgcctggccccggacctc
ctggccagtatctccaacatctctccccacctgatgattgttatcgcagctgtttga
DBGET
integrated database retrieval system
