KEGG   Thamnophis sirtalis (common garter snake): 106543208
Entry
106543208         CDS       T06107                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tsr03037]
    106543208 (IFT122)
Cilium and associated proteins [BR:tsr03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   106543208 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Beta-prop_EML_2 WD40 Zn_ribbon_IFT122_C WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 TPR_7 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N TPR_IF140-IFT172 Beta-prop_IFT140_1st TPR_GEMI5 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_HPS5 TPR_IFT80_172 PEP5_VPS11_N WD40_MABP1-WDR62_1st WD40_like eIF2A Beta-prop_WDR75_1st Beta-prop_IFT140_2nd TPR_COPA_B TPR_12
Other DBs
NCBI-GeneID: 106543208
NCBI-ProteinID: XP_013914618
UniProt: A0A6I9XVE4
LinkDB
Position
Unknown
AA seq 1183 aa
MRAALTWRDKVEQCIYDLAFKPDGTQLIIASGNRLLVYDTSDGTLIQPLKAHKDTVYCVA
YAKDGKRFASGAADKTVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVNKHKVSNKITCCSWTNDGQYLALGLYNGIVSIRNKNGEEKVKIERPGGSLSPVW
SISWNPSRDEHNDILAVADWGQRLSFYQLSGKQIGKDRVLNFDPCCVSYFSKGEYILMGG
SDKQVSLYTKDGVRLGTIGEQSTWVWTCKAKPDSNYVAVGTQDGTISLYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKNRELVKKIAIYKNRLAIQLPEKIQIFELYSDDS
SDMHYRVKEKIAKKFECNLLVVCSEHIILCQEKRLQCLSFSGTKEREWVMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNPFAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDINTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMTAVEVPQSAPMYQYLERKLFKEAYKIACLGVTDTDWKELAMEALEGLEF
ETAKKAFTRMRDLQYLELISSIEERKKRGESNNELFLAEIYAYQGKFHEAAKLYKRSSHE
NLALDMYTDLRMFDYAKEFLGSGDPKDTKMLITKQADWAKNINEPKAAVEMYMTAGEHLK
AIEISGDQGWVDVLIDIARKLDKAEREPLTKCAYYFKKLLNHGYAAETYIKIGDLKALTQ
LYVETQQWDEAFALCEKHLEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQTEAVKVLE
QLTHNAVVESRFNDAGYYYWMLSMQCLDIAQDNEEQKTEMLKKFHHFQHLAELYHAYHFI
HKCTEEPFNHYLPETLFNVSRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYKLARHA
YDKLQGLQIPARFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTHNPLLNNLGNVCINCR
QPFVFAASSYDVLHLVEFYLEDGITDEEAVALIDLEVPRLNKIGSEWQEQMSNGVQTMRL
LYKVDEIEEDDPFTAKLSFEQGGSEFVPVVVNRAILKSMSRRDVLIKRWSKPLQWQYFRS
LLPDNPITMCSFCFQMFHSEDYELLVLQHNCCPYCRRKIDESS
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgcgagctgcgttgacttggagggataaggtcgagcagtgtatctacgaccttgccttt
aaaccggatggaacacaactaataattgcatctggaaacagattattggtgtatgataca
tctgatggaacattaatccagcccttgaaagcccataaggatacagtatattgtgtagca
tatgcaaaagatggaaaacgctttgcatcaggagctgcagacaaaactgtcataatctgg
acttcaaagttagaaggtatcctgaagtacacgcacaatgattctatacaatgtgtgtct
tataatcctgttacacatcaacttgcatcctgctcttcaagtgattttggactatggtct
cctgaacagaagtcagtcaacaaacataaagttagcaataagatcacttgttgtagttgg
acgaatgatggacaatatcttgctttggggttgtacaatggtattgtcagcattaggaat
aaaaatggtgaagagaaagtcaaaattgaacgaccaggaggatctttatctccagtttgg
tctatttcttggaatccatcaagagatgagcataatgatattttagctgtggcagattgg
ggacaaaggctttccttttatcaactaagtggcaagcaaattggaaaagacagagtcctg
aactttgatccatgttgtgttagctatttttcgaaaggagaatacatcttaatgggaggc
tctgacaagcaagtatccctttatacgaaggatggagtgcgtcttgggaccataggtgaa
cagagcacttgggtgtggacttgtaaagctaagccagattccaattatgtggcagtagga
acccaggatggaaccatttcactgtatcagctgattttcagcacagtccatggtctttat
aaggatcgctatgcttacagagacagcatgacagatgttattgtccaacatcttatcact
gaacaaaaagttagaataaaaaaccgagagcttgtaaagaaaatagcaatctacaagaac
agattagcaatccaattaccagagaaaatccaaatttttgaactgtattccgatgattca
tcagacatgcactaccgagtgaaggaaaagatagcaaaaaaatttgaatgtaacttacta
gttgtgtgttctgaacacattatcttatgtcaggagaagagactccagtgtctttctttc
agcggtacaaaagaacgggaatgggtgatggaatctctcattcgatatataaaagtaatt
ggaggacctccaggcagagaaggccttttagtgggtttaaagaatggtcagattctcaag
atctttgtggacaatccttttgcaattgttttgctaaaacaatcgacagccgtgcgttgc
ctggatatgagtgcatctcgaaacaaactggcagtagttgatgaaaatgatacctgtctg
gtctatgatattaacaccaaagaattactgtttcaggaacccaatgctaacagtgtggct
tggaacacacagtgtgaggacatgctttgtttctctggagggggatatctcaatatcaaa
gctagcaattttcctgtccatcagcagaaacttcagggatttgtagtaggatataatggc
tccaaaattttttgccttcatgttttttctatgactgctgttgaagttccccagtcagca
cctatgtatcaatacttggaaagaaaactgttcaaagaagcctataagattgcttgttta
ggtgtaactgatacggattggaaagaactggctatggaggctttagaaggacttgaattt
gaaacagccaaaaaggcgtttaccagaatgcgagatcttcagtatttagaactcataagc
agcattgaggaaaggaagaagcgtggtgaaagcaacaatgaactgtttctagcagagatt
tatgcctaccaaggaaagttccatgaggcagccaagttgtacaaaagaagtagccatgaa
aacctagcccttgatatgtacacagacttgcgcatgtttgactatgcaaaggaattcctt
gggtctggggaccccaaagatacaaagatgctaatcacaaagcaagcagactgggccaag
aacatcaatgaaccaaaagcagcagtagagatgtacatgactgcaggggagcatttgaag
gccatagaaatcagcggagatcaaggctgggttgatgtattgattgatattgctcgaaag
ctggataaagcagaacgagaacctttgacgaagtgtgcctattattttaaaaagttattg
aaccatggatatgctgcagaaacctatatcaagattggtgatctgaaggccttgacacag
ctctatgttgaaactcagcagtgggatgaggcttttgctttgtgtgaaaaacaccttgaa
tttaaagatgatgtctatgttccatatgctcagtggctggcagaaaatgatagatttgaa
gaagctcaaaaagcattccataaagctggcagacagactgaagctgttaaagtattggaa
caattaactcacaatgctgtggtagaaagccgattcaatgacgcaggatattattactgg
atgttatccatgcagtgtttagatatagctcaagacaacgaggagcagaagaccgaaatg
ttaaagaagtttcaccacttccagcacttggcagaactgtatcatgcctatcacttcatc
cacaaatgcactgaagaacccttcaatcactacttacccgaaacactcttcaatgtgtct
aggtttttacttcatagccttaccaaggaaactcctctgggaatttctaaagtcaataca
ttatttgccctggcaaagcagagcaaagctctgggtgcctataaattggctcgtcatgcc
tacgacaagttgcaaggactacagattccagccagatttcaaaaatctgttgaactggga
agcctgacaatccgatccaagcctttccacgacagcgaagagctggtgcctttatgttac
aggtgctccacccacaatcctttattgaacaacctggggaatgtctgcattaattgcagg
caaccttttgtttttgctgcttcctcttatgatgtcttgcatctggttgaattctactta
gaagatggaataactgatgaagaagctgttgctctgattgatctagaagtacccagacta
aacaaaataggcagtgaatggcaagagcagatgagtaatggtgtacaaacaatgaggctt
ctttataaagtggacgagattgaggaagatgatccatttacagcaaaattgagttttgag
caagggggctctgaatttgtccctgtcgtagtgaaccgtgcaattctcaaatccatgagc
aggagagatgtgctgattaaacgctggtcaaagccattacaatggcagtacttccggtct
ctccttccagacaatcccattaccatgtgttctttctgctttcagatgtttcattcagaa
gattatgagctcctggtgctccagcataattgttgcccatattgtcggagaaaaatagat
gaatccagctaa

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