Thamnophis sirtalis (common garter snake): 106543259
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Entry
106543259 CDS
T06107
Symbol
ABCD4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr02010
ABC transporters
tsr04146
Peroxisome
tsr04977
Vitamin digestion and absorption
tsr04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106543259 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106543259 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
106543259 (ABCD4)
04980 Cobalamin transport and metabolism
106543259 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106543259 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106543259 (ABCD4)
Enzymes [BR:
tsr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
106543259 (ABCD4)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106543259 (ABCD4)
Transporters [BR:
tsr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
106543259 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
AAA_29
AAA_22
DEAD
AAA_7
nSTAND3
T2SSE
TsaE
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
106543259
NCBI-ProteinID:
XP_013914702
UniProt:
A0A6I9XLA5
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MAPGKTARKTIRPQLDRQFLHRFLKIQTILFPTFTSKNALMFLTLLVVALLTQLIIYQVG
LIPSQYFSVLGGKDLYEFNKLTAVALILIVLNSLLKSLDQFICNLMYVSWRKTLTEYLHG
YYFQGQEYYTLNVLHEEIDNPDQRISQDVERFCKQLSSMASKLIISPFTLAYYTYQCFYS
TGWQGPLSIFGYFIIGTIINKFLMSPIVSKLVQQEKLEGDFRFKHMQLRVNAESVAFYRA
GEVEHMRTNYKLQNLLKTQRELIGKELWLYIGINTFDYLGAILSYVMIAIPIFNGVYDDL
NPTELSSLVSKNAFVSIYLIHCFSILIDLSTTVSDVAGYTHRIGELQEVLLDLSKKQNHT
ESEDKLDFDSISREKRVSSDTAFVLEHVSLAAPSKNLLIKDLNMRVTQGDNLLITGNTGT
GKTSLLRILGGLWKCKQGEVHMLSSFGPHGVVIIPQRPFFTDGTLREQIIYPLKEIYPDS
GSIDDDRILRFLELTGLSDLLMRTGGLDQPVDWNWYDILSPGEMQRLSFARLFYLQPQYA
VLDEVTSALTEDVENEMYRICIQLGMTLVSVGHRKSLEKFHSWILKLYGEGKWELSRIEK
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgggaaaacagctaggaaaactatccggccccagctggatcgtcagttcctc
caccgattcctaaagatccaaacaattttatttcctaccttcacctctaagaatgcgctg
atgtttctaaccttgcttgtagttgctttgttgactcaattgatcatttaccaggtggga
ctgattcccagtcaatatttctcagttctggggggaaaagatctttatgagttcaataag
ctgacggcagttgctctgattctcattgtactcaattctttgctgaagagtttagaccag
tttatctgcaatttgatgtatgtcagctggagaaagacactaactgaatacctccatggc
tactactttcagggccaggagtattatactctgaatgttctacatgaggaaattgataat
ccagaccagagaatcagtcaagatgtggagagattctgcaaacaactgagctccatggcc
agtaagctgatcatctcacctttcacccttgcttattacacctatcaatgtttttacagc
actggttggcagggtccgctaagcatctttggctattttatcattgggacaattattaac
aagttcctcatgagtcccattgtttcaaaattggtgcaacaggaaaaacttgaaggtgat
ttcaggtttaagcatatgcagctgcgggtgaatgctgaatctgttgctttctacagagct
ggggaagttgaacacatgcgaaccaactacaagcttcaaaaccttttaaagacgcaaagg
gaattgattggaaaggaactgtggctatacattgggatcaacacctttgactatttgggc
gccatcctgagttacgtgatgattgccattcctatatttaatggagtatatgatgatctg
aatcccacagaattgagctccttagttagcaagaatgcctttgtctccatttacttgatt
cactgtttcagcatcttaattgatttatctaccacagtgtctgatgtcgctggctacacg
cacagaattggagagttgcaggaagtattgctggacctttccaagaagcaaaatcatact
gaatcagaagacaaactggactttgacagcatttctagagagaagagggtctcaagcgac
accgcttttgttctggagcatgtttcccttgcagctccctccaagaacctgcttatcaag
gacctaaacatgagagtcacacaaggggacaatctcctgattactgggaatacaggcaca
ggaaagacatctttgttgcgtattctcggaggcctgtggaagtgcaagcagggagaagtc
catatgctgagttcttttggcccccatggagtggtgatcatacctcagcgtcctttcttc
acagatggaacgctgcgggaacagattatataccctctaaaggaaatctatccagattct
gggtctatagatgatgataggatactcaggttcctggagctgactggactgtcagacttg
ttaatgagaacaggaggtttggaccagcctgtggactggaactggtatgacattctttca
ccaggtgagatgcaaaggctgtcatttgctcgcctgttctacttacaaccccagtatgca
gtgctagatgaagttacgagtgcattgacagaagatgtagagaatgagatgtataggatc
tgcatccaattgggaatgactctggtcagtgtgggccatcgcaaaagtctggaaaagttc
catagctggattttgaaactatatggagaaggaaaatgggagctatcaagaattgagaaa
cgctga
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integrated database retrieval system
