Thamnophis sirtalis (common garter snake): 106543703
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Entry
106543703 CDS
T06107
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04110
Cell cycle
tsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106543703 (RB1)
04218 Cellular senescence
106543703 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106543703 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106543703 (RB1)
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106543703 (RB1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
106543703 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
PRMT_C
Motif
Other DBs
NCBI-GeneID:
106543703
NCBI-ProteinID:
XP_013915241
UniProt:
A0A6I9XMU9
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MAPTSPPRKMGTVPTSQTDDSSESAGESETPAAAPPAPDRLLFAETDFVSLCDALRITDN
VRITAWKTYEKMDVESQLKKELWGICIFMAAVDLDEMTFTFTELLKCLKISVCKFLHLIK
EIDVNMDTISAKMDCTISRLQRKYDVLLVLYQKFTRTCEIICIDKPNDQTCAEISSCLFI
KNCWIMFLLAKGKILQMEDDLVISFQLLLCVFDYCTRQLPPALLKEPYKSIIAVSSGTSR
QGQNKSARTSKIDTDIKVIEELCKEYDCNLDEVKNVYFTSFIPFLNSMGTTTFRRLQEVE
DLSTKYEEMYLKNKDIDARLFLEKDETLKYENEECLQLERTPTKNQIEDSPIVLPQTPVR
AAMNTIQQLMIILNSASDTPSDNLLFYFNNCTVNPHESIVKRIENMGIIFKNKFAEAVGQ
GCAEIGSQRYKIGVRLYYRVMESLLKSEEKRLSVHNFSKLLNNDVFHISLLACALELVMA
TYGTSRNASQSMNIETDLSFPWIINILDLKAFELYMIVESFIKAEPSLTREMIKHLECCE
HKIMESLAWQSNSPLFELIKQSKDREGQADEPEPANYFTQPHQHNHSAADLYLSPMKSPK
KKVSSTFVYSSPESQAVGLNQSQKPHKSISLSYFYKKVYCLAYRRLNNLCLRLLPDHPEL
EHVIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKTIVTAYKELNNANQ
ETFKCVLIREGQYDSIIVFYNMVFMQRLKTNILQYASNRPPTLTPIPHILQSPYKFSNSP
LRVSAGNNIYVSPLKNPSKFSEGLLSPTKMTPRTRILVSIGESFGSSEKFEKINKMVCNS
DRHLKRNAELSTTPKPLKRLRFDIEGQDEADGREHLSGESKFQQKLAEMTSTRTRIQNQK
LNDGAEVSDTVQK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccagccccccccggaaaatgggaactgtccccacaagccagacggacgac
agctccgagtccgcgggggaatctgaaacgcccgccgccgcccctccggctcctgacagg
cttttgtttgctgaaacagactttgtttccttatgtgatgctttacgcataacagacaat
gtgagaataactgcttggaagacctatgaaaaaatggatgtagagagccagctaaaaaaa
gaattgtggggcatctgcatttttatggctgcagttgacctggatgagatgacattcact
tttacagaacttctgaaatgtttaaaaattagtgtatgcaaatttctgcacttgattaaa
gaaatagatgtcaacatggatacaattagtgctaaaatggactgtactatatcacgtctg
caaaggaaatatgatgtactcttagtactctaccaaaagtttacaaggacttgcgaaatt
atttgcattgacaagcccaatgatcaaacttgtgctgaaataagttcttgcttatttata
aaaaactgctggatcatgtttcttttggcaaaaggaaaaatactgcagatggaagatgat
ttggttatctctttccagcttctgctgtgtgtttttgattattgtaccagacaattaccc
cctgcactacttaaagaaccttacaaatctataattgcagtatcgtctggaacaagtaga
caaggtcagaataaaagtgcaagaacatcaaaaattgatacagacatcaaggttattgaa
gagctctgtaaagagtatgattgtaatttggatgaggtgaaaaatgtttactttactagc
tttattccatttctgaattcaatgggcactacaactttcagaagacttcaggaggttgaa
gatttgtcaaccaaatatgaagaaatgtatttgaaaaacaaggatattgatgctagatta
tttctagagaaagatgagactttgaaatatgaaaatgaagaatgtttgcagttagagaga
actcctacaaaaaaccaaattgaagattctcctattgtacttccacaaacccctgttcga
gctgcaatgaatactattcagcagttaatgataatattgaactctgcaagtgatacccct
tcagacaaccttctcttctattttaataactgcacagttaatcctcatgaatcaatagtg
aaaagaatagaaaatatgggtattatcttcaagaacaaatttgctgaagcagttggacaa
ggctgtgctgaaattggatctcagaggtacaaaattggagtaaggttatactatcgtgtg
atggaatccttattaaagtcggaagaaaaacgcctgtcagttcataatttcagcaaactt
ttgaataatgacgtcttccacatctctctgttggcttgtgctcttgagctagtcatggct
acatatggcacttcaagaaatgcttcacagagcatgaacatagaaacagacttgtctttt
ccatggatcatcaacatcctggatttgaaagcctttgaattatacatgattgttgaaagc
ttcattaaagcagaaccaagcttgaccagagagatgataaaacacctagaatgctgtgaa
cacaaaattatggaatcgcttgcatggcaatcaaattcaccattatttgaactgataaag
cagtccaaagaccgagaggggcaggctgatgagcccgaacctgccaactattttactcag
cctcatcaacataaccacagtgctgcagatttgtacctctctcccatgaagtcccctaag
aaaaaagtttcttccacttttgtatattcttctccggagtcgcaggctgtggggctaaat
caatctcagaaacctcataaatctatttctttgtcatatttctataaaaaagtgtattgc
ttggcttatagacgattaaataacttgtgtttgcgtcttctgcctgaccatcctgaactt
gaacatgtgatatggaccctttttcatcacacactgcaaaatgaatatgaactgatgaaa
gacagacacttagaccagattatgatgtgttccatgtatggcatatgtaaggtgaagaat
attgatctcaggtttaaaactattgtgacagcatacaaggaactcaacaatgcaaatcaa
gagacattcaagtgtgtgttgatcagggaaggacaatacgattccattatcgtcttctac
aacatggtatttatgcaaagactgaaaactaatattttgcaatatgcttccaataggcct
ccaacattaacacccattcctcacattctacagagcccttataagttttctaattctcct
ttacgtgtttctgctggaaataacatctatgtctcacctttgaagaatcccagcaaattt
tctgaagggctattgtcacccacaaaaatgacacccagaacaagaatattggtttcaatt
ggtgaatcctttggaagttctgaaaagtttgaaaagataaacaagatggtatgtaacagt
gatcgtcatctcaaacggaacgctgaactaagcaccactcctaagcctttgaagagattg
cgttttgatatagaaggtcaagatgaagctgatggaagggaacatctttctggagagtca
aaattccaacaaaagcttgcagaaatgacatctactaggactagaatacaaaaccagaaa
ctgaatgatggtgctgaagtttcagatactgtacaaaagtga
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