Thamnophis sirtalis (common garter snake): 106544554
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Entry
106544554 CDS
T06107
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC106544554
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04140
Autophagy - animal
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106544554
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106544554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106544554
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106544554
Membrane trafficking [BR:
tsr04131
]
SNARE
SNARE associated proteins
Others
106544554
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
106544554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
Zn_ribbon_RRN7
Sep15_SelM
Motif
Other DBs
NCBI-GeneID:
106544554
NCBI-ProteinID:
XP_013916326
UniProt:
A0A6I9XRD8
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MPPIQVGADHQTIPTLGNNDFMPESSSLGSSPCQGTAMVSSPNAKIQNQQLPQMSASPTE
GDPISGLVEDQGDRGGQASGGESRSSPGGAILAQEVLVRRPCQPLRSETVENSSGPNIPQ
PRGHQPPRSPVAKISRLALEGDLLRKQNISDKVICTIQVSRRPSTTRIYDATWAAFSSWC
KDRGIVDFSASVPHTLDFLQEGLDKVLAPSTLRRQVVALSTILARSCSRSLRQYPQIKSF
LKGAANISPPTVHRYLSWDLPFVLRALTGPPFEPLRTSSLRHLTIKTAFLVAITSTCRLI
KKQLVNSIKALQKHYVTSDALVTSDDEDANTLCCVLEAVFVHGLNTKHIKAEVGAKGKKH
GGRLPQPVFWTLLKSITHRNIISELENLVFINTDVGRCRAWLRLALNDGLMECYLKLLLH
EKSQLSEYYHSPALLLDPEEVEFLLSYLQGLSSLAFDLSYKSAVLNEWTITPLSLSGLCP
AWELLDPLVGLESQRKETLGFLSQSSGSDEIEAHPAILPVPKSQQADKLTASNLSISTTG
SSQLSSSLDSDILLPANLTSTTSPAREKEPISNDSEFDMTAATADLDQDQDLQEVLAEFT
RTQRKLESVGVHEANIVSRSSPPECPGPATSFCTAHLPRTVMAEASVDIMLTELMTNSQL
PNLPKSGESVSSTSVQQTSMLATIIVTKEPVDVAQIHCNIKGGTKTWASEVNGSDGSLPG
TDQLLSPVSPVVSPMILHFLSFPGCSRQIGFFFMKPKLCSFTGLYYCDNCHQDEESVIPS
RLIHNWDLSRYPICCQALKFLAKRVQNQPLIDLKLVNETLYDHVEQMKQIYQNREQLKLL
GDYLVLCRSGALKEISKRLDHWHYLLECPHKYSVADLRQVGDLEKRKCFNLEAGGNSVQE
NNTHFFTP
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaatccaggtcggtgccgatcatcaaactatcccaactcttgggaataatgat
ttcatgcctgaaagtagttccctgggctcgtctccatgccagggaactgcaatggtttct
tctcccaatgcaaagatccaaaaccagcaacttccccagatgagtgcgtctcccacagaa
ggtgatccgatctctggcctggtggaggatcaaggcgatcgtggtggccaagcttctggc
ggagaaagcagaagttctcctggtggcgccattctggcccaggaggtcctggtacgcaga
ccttgtcagcctctccgttcagagaccgtggagaattcctcaggaccaaatatccctcag
ccaaggggccatcagccacccagatccccagtggctaaaattagccgtttggcacttgaa
ggggacctcctgaggaaacagaacatttctgacaaggtcatatgcaccatacaagtgtcc
aggagaccatccaccaccagaatatatgatgcgacctgggccgccttttcctcctggtgt
aaagatagaggaattgtagatttttctgcttcagtccctcacaccctggacttcctacag
gagggtctggacaaggtcctggcgcccagtacactcaggcgtcaggttgttgccttatct
accattctggcaaggagctgttctcggtctctgagacaataccctcaaattaagagtttc
ctgaagggcgcagcgaatatcagcccgccgacagtccatcgatacctgtcctgggacctt
ccatttgttttgagagctttgacgggtccgccattcgagcctcttcgtacgtctagcctg
cgccatctgaccatcaagacagcctttctggtggctatcacatctacctgcaggttgatc
aagaagcagctggtgaactccatcaaagccctgcagaagcattatgtgacctctgatgct
cttgtaacaagtgatgatgaagatgctaatactctttgttgtgtattggaggctgtgttt
gtgcatggtttgaacactaagcacatcaaagcagaggttggagcaaaagggaaaaaacat
ggagggcgacttcctcagccagtgttttggactctgctaaaatctattactcacagaaac
ataatttctgaactggaaaacttggtcttcatcaatacagatgtggggcgttgccgtgca
tggttgaggctggctctgaatgatggcctgatggagtgttacctaaaactcttgcttcat
gaaaagtctcaactctctgaatattaccattcacctgctctgcttctggatcccgaggag
gttgaatttctcctcagctatttgcagggcttgtcttctttggcttttgacctctcctat
aagtcagcagtattgaacgagtggaccatcacacctttatccttgtcaggcctttgtcct
gcctgggaactgttggatcctcttgtggggctggaatctcaaagaaaggagacacttggt
tttctctcacaatcttctggctctgatgaaattgaagctcacccagccatcctgcctgtc
ccgaaaagtcaacaggcagataaactcacagcttccaacttgagcatcagcacaactggt
tcctcacagctctcttccagccttgattctgacattcttctcccagccaatcttaccagc
actaccagcccagctagggagaaagagcccatctccaatgactctgaatttgacatgaca
gcagcaacagcagacttggaccaggaccaggacctccaagaagtgttagcagaatttacc
aggacacagagaaagctggaatctgtaggagttcatgaagcaaacattgtctctcggtct
tccccaccagagtgccccggccctgccaccagtttctgcactgcgcaccttcctcgtact
gtaatggcagaagcttctgttgacatcatgctaactgaattaatgacaaattcacagctt
cccaatttacctaagagtggagaatctgttagtagtaccagtgtccaacagacctcgatg
ctagccacaataattgtgaccaaagaacctgtggatgtggcccaaattcattgcaacatc
aagggaggaactaaaacctgggccagtgaagtcaatggttctgacggaagccttccagga
acagaccagcttctttcaccagtctcaccagtggtctcccctatgatcttacattttctt
tcctttccaggctgctccaggcagattggtttcttctttatgaagcctaagctgtgttca
ttcaccggcctctattactgtgacaattgccaccaagatgaagagtctgtgataccttca
cgtctaattcataactgggatctttccagatatccgatttgttgccaggctctgaaattc
ctagccaaaagggttcaaaatcaacccttgattgacctgaagctggtgaatgaaaccctc
tatgaccatgtagagcaaatgaagcagatctatcagaatcgtgagcagctgaagctcctg
ggtgattaccttgtcctttgtcgcagtggcgccctgaaggagatcagtaagaggcttgac
cactggcactatctcctggagtgtccccataaatacagtgtggctgacctgagacaggta
ggagatctggaaaaaaggaaatgtttcaatctagaagcaggtggaaattcagttcaagaa
aataatacccatttcttcaccccctaa
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