Thamnophis sirtalis (common garter snake): 106544659
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Entry
106544659 CDS
T06107
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106544659
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106544659
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106544659
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106544659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
Suppressor_APC
Motif
Other DBs
NCBI-GeneID:
106544659
NCBI-ProteinID:
XP_013916484
UniProt:
A0A6I9XKY2
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MGEKLQDEIEIMITDQHGNQIQSLASFCMTDLKISGNGLDKSDLKTFWKQSTQTISIKGI
KFEPGPPEVKELHVAWHNLSYYLKLRLIAGPPVKLDLPDWIEPLTAISVINGKELPKALI
IQLLDQWNNPSGERNVKITLIKDNKIKIFPSNVQYLTDETGRASFGVPIICAPKGQYPLQ
FKALCNKNVLSSPVIKINVLPDPEKPVRLNVTYDENAIFTAGNTFPDFKVNVISEDDNNI
TNINPGSICMKIMETDNNENITTFQCTKANNDNDEGFFYFRNNMVPEKATKYSIQCIFTI
DETSVLRSKEIIVDVVPNKPALLKPQTLPKTPAVFNVQNVDSRTIVKNLTLIVTDEYKNR
TGSDLDGKIVAKIKSSTENDLDSPLFMGETSTVEFPFHKGIVEIEALVLAENSPGRNKTE
YTLVLEPVIPAWKHLQPYFLTFMFYNDYKVQQQMSNLTQERDCLSQSIKTYRDWFDAKDQ
LIAETKRQAEEVGKKELQLKNELKRSQINIPQANVLQYIDSSINLKQAEQERILKQPRRI
CTLSNYSRRNQYILGKVSHLAQIEDDEVAKVVSWHLANDMDCIVTLTTAAARRIFDETKG
TQQVLPLDSIYKKSLPDWNRPLPHLNNEGNSFSPIGNPVFARNLLIFPEHKEHCQIVFGM
LLGNTIIIDNLEAANHYRKEVVKMTYCPTLLTREGDRISSKGKFGGLQNRAPPIESLQEK
VFGAPLPPDYNIVSLQIDLLRQYRAALLQVNKVKTDLEEQQQSFNTVEMQCKKEELAELE
DKLKLIDQELGKTSSSQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaagctgcaggatgaaattgagataatgattaccgatcagcatggaaatcag
attcagtccctggcatcattttgtatgactgacttgaagatttctgggaatggcctggat
aaatcagatttgaaaactttttggaagcaaagtacacaaactatttctatcaaaggaatt
aaatttgaaccaggcccaccagaagttaaagaactgcatgttgcttggcataatttatcc
tattacctgaagttaagattgattgctggccctcctgttaaattggatcttccggattgg
atagaaccattgacggctatatctgtaattaatggcaaagaattaccaaaggctcttata
atccagctccttgatcagtggaataatccatctggtgaacgtaatgtgaaaatcacactt
ataaaagataataaaataaaaatttttccttcaaatgtgcagtatttaacagatgaaact
ggtagagcaagctttggagttcctattatttgtgctcctaaaggacagtaccccttgcag
ttcaaggccctctgtaacaagaatgtgctaagcagtccagtgatcaagataaatgttttg
cctgacccagagaaacctgtacgtttaaatgtaacatatgatgagaatgctatctttact
gctggaaacacttttcctgatttcaaggtcaatgttatttctgaagatgacaacaatatt
acaaatataaatccaggaagtatttgtatgaaaatcatggaaacagacaataatgaaaat
attacaacatttcagtgtaccaaagcaaacaatgacaatgatgagggctttttttacttc
aggaataacatggttccagaaaaagcaaccaaatacagcatccaatgtatatttacaatt
gatgaaaccagtgttcttcgcagtaaagagattatagttgatgtggtgccaaacaaacca
gcactgttgaagccacaaactttgccaaagacccctgctgtttttaatgttcagaatgtt
gacagtcggaccattgtcaagaacctgactctcattgtaacggatgaatacaaaaaccgt
acaggaagtgatttagatgggaaaattgtagcaaaaatcaaaagttcaactgagaacgac
cttgatagtcccctgtttatgggtgaaacaagtacagttgaatttccttttcacaaagga
attgttgaaattgaggctcttgtgctagcagaaaatagtccaggaagaaataaaaccgag
tatactcttgtattggagccagtcatacctgcttggaaacatttgcaaccttatttttta
acctttatgttttataatgattataaggttcaacagcagatgtcaaatcttactcaagag
agagactgcctttcacagtcaataaaaacatatagagattggtttgatgctaaggatcag
cttattgctgaaacaaaacgccaagcagaggaagttggaaaaaaggagttacagctcaag
aatgaactgaaaagaagtcaaattaacatacctcaggccaatgtgctgcaatatattgat
tcctcaataaaccttaagcaggctgagcaggaaagaatattgaaacaacctagaagaata
tgcacacttagcaattattccagacgtaatcagtatattttgggcaaggtttcacactta
gcacaaattgaagatgacgaagtagcaaaggtcgtttcctggcatttagcaaatgatatg
gattgtatagtcactttgacaacagctgctgcacggcgtatttttgatgagactaaaggt
acacaacaagtattgcctcttgattctatttataagaagagtcttccagattggaacaga
cctttacctcatttgaacaatgaaggaaactctttcagtcctattggaaatcctgtattt
gctaggaacttgctaatatttccagagcacaaggagcattgccaaatagtgtttgggatg
ctcttgggtaatacaattattattgacaacctggaagctgccaatcattacagaaaagag
gttgtgaaaatgacatattgtccaactttattaacaagagagggggacagaattagcagt
aaaggaaagtttggaggccttcagaatagagcccctcctatagagagtcttcaggagaag
gtttttggagcacctctgccaccggattacaatattgtctccctacagatagatctgctt
cggcagtaccgtgcagcacttctccaagttaataaagtaaaaactgaccttgaagaacaa
caacaatcctttaatactgtagaaatgcaatgtaagaaagaagagcttgctgaactggaa
gacaaacttaaattaatagaccaggaattaggtaagacctcatcaagtcaa
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