Thamnophis sirtalis (common garter snake): 106545479
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Entry
106545479 CDS
T06107
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106545479
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106545479
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
IRK
Motif
Other DBs
NCBI-GeneID:
106545479
NCBI-ProteinID:
XP_013917533
UniProt:
A0A6I9Y2Z0
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MAPIESSVFICLSVCPPSCRIPPVPETRGKPAREAPRGGENRPTGFAQDLSSSPRPRAKP
VPLQPNGGSGAPLGMFRKKRKCDVMPVVLVRPTNRTRCLDSTGAGMGPSWRQQDSPLPTI
THCAGCTAAWSSCSFNSSDMETPLQFQPSFCSEQQQQQQQQHPHPHYHQHHQQQHHHQQQ
HSEERQPKQQSSPCFQCNSCVYYGAAAAAGDNLPLLLRTSSPLSVAFRTRSSPLSCSAAS
SRQGSQLNVSELTPSSHASSFRQPHHYSQPHQHHHSHSHPCHSVHQQQPPPQPAGSPNSS
TGSDSHHYQLQQQRRESNPFTEIAMSSCRYNGGVMRPLSNLSSSRRNLHELDSEAQPLQP
QPPPPHSSPTASAAAAGPEIVVSKPEHNNSNNLALYGSGGSGNGNGSQTNSGGKTSKKKN
QNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYTKESLYSLALKCLI
SLSTIILLGLIIVYHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYT
FTWTARLAFSYTPSTTIADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKI
NFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISI
TFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQ
LTKRVKNAAANVLRETWLIYKNTKLVKKIDHAKVRKHQRKFLQAIHQARKLRSVKMEQRK
LNDQANTLVDLAKTQNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIQALPGLISQT
ISQQQREFLEAQIQNYDKHVTYSAERSRSLSRRRRSSSTAPPTSSESS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattgaatcctctgtatttatatgcctgtctgtctgcccaccgtcttgcaga
atcccaccggtgccagaaactcgagggaaacccgcacgggaggcgccaagaggcggcgag
aatcgtccgacaggatttgcccaggatttgagcagttcgccgcggccccgagccaagccg
gtcccactccagccgaacggtggaagcggagcgccgctcggcatgtttcggaaaaagcgt
aaatgtgacgtgatgcccgttgttttggttcgcccgaccaatcggactcgttgcctggat
tctacgggagccgggatgggcccgtcgtggcggcaacaggactcccctctgccgaccata
acgcattgcgcagggtgcaccgccgcctggtcttcctgcagctttaacagctctgacatg
gaaaccccattgcagttccagccgagcttctgctcagagcagcagcagcagcagcagcag
cagcacccacacccgcattaccaccagcaccaccagcagcagcaccaccaccagcagcag
cacagcgaagagaggcagccaaagcagcagtccagcccgtgcttccagtgcaacagctgc
gtttattacggggctgcggctgccgcgggcgataacctgccgctgcttctccgcacttcg
tcgcctctgtcggtcgccttccggactcgctcctcgcctctctcgtgctccgcagcttct
tcccgccagggcagccagctcaacgtgagcgagctgaccccttccagccatgccagttcg
ttcaggcagccacaccactattcccagccccaccagcaccaccactcccactcccacccg
tgccatagtgtgcaccagcagcagccgccgccccagccggcgggcagccccaacagcagc
accggcagcgacagtcaccactaccaacttcagcagcagcgccgcgagagcaaccctttc
acggaaatagccatgagcagctgcaggtacaacggcggcgtcatgcgtcctctcagcaac
ctgagctcgtcccgtcggaacctccacgaactggactccgaagctcagccgctgcagccc
cagccgccgccgccgcactccagccccaccgcctcagctgccgccgccggccccgagatc
gtggtgtccaagcccgagcacaacaactccaacaacttagcgctctacggatccggcggc
agcggcaacggcaacggcagccagaccaacagcggcggcaaaaccagcaagaagaagaac
cagaacatcggctacaagttgggacatcgccgcgcgctctttgagaagcggaagcggctg
agcgactatgcgctgatcttcggcatgttcgggatcgtagtgatggtgatcgaaaccgaa
ctgtcttggggcgcttacaccaaggagtcgctgtattcattagccctcaaatgccttatt
agtctctctacaatcattctgcttggtctaattattgtataccatgcaagggaaattcag
ttatttatggtggacaatggagcagatgattggagaatagccatgacttatgagcgcatt
tttttcatctgcttggaaattttggtatgtgctattcatcctatccctggcaactacact
tttacatggacagctcgtcttgccttctcctataccccatctacaacaatagctgatgtg
gatataattttatccatacctatgttcctgagactttatcttattgccagagttatgctt
ttgcatagcaaacttttcactgatgcctcatccagaagcattggagcactaaacaagatc
aacttcaatacacgttttgttatgaaaaccttaatgacaatatgcccgggaactgtactc
ttggtttttagtatctccttatggataattgctgcatggactgtcagagcttgtgaaagg
tatcatgatcaacaagacgttactagcaacttccttggagcaatgtggttgatttcaata
acttttctctccattggatatggagatatggtacctaatacttactgtgggaaaggagtt
tgcttgcttactggaataatgggtgctggttgcactgcactagtggtagctgtggtagca
agaaaactagaacttaccaaagctgaaaaacatgtacataatttcatgatggatacccag
ctaactaaaagagtgaaaaatgcagctgccaatgtactcagggaaacatggttaatttat
aaaaacaccaagctggtaaaaaaaatagaccatgcaaaagtaaggaaacatcagcgcaaa
ttcttgcaagctattcaccaagctcggaaattaagaagtgttaaaatggaacagagaaaa
ctgaatgatcaggcaaacactttggtggacttggcgaagactcaaaacatcatgtatgat
atgatttcggacttgaatgaacgaagtgaagactttgagaagaggattgttactctggaa
acaaaactggaaactttaattggtagcatccaagctctccctggactgattagccagaca
attagccagcagcaaagggaatttcttgaagctcagatacaaaattatgataagcatgta
acctacagtgcagaacgatcaaggtccttgtctagaagacgaagatcttcctctacagca
ccacccacttcatcagagagtagctag
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