Thamnophis sirtalis (common garter snake): 106546292
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Entry
106546292 CDS
T06107
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00310
Lysine degradation
tsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106546292 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106546292 (SETDB1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
106546292 (SETDB1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106546292 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106546292 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
Pre-SET
SET
Motif
Other DBs
NCBI-GeneID:
106546292
NCBI-ProteinID:
XP_013918604
UniProt:
A0A6I9XRA4
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MLTCVFVARVSEDGNRADPPSSPAPRGEGSAAMAESEDILELQREVMEEMGISLEDLKQL
IEEEMEKSEYIKQRKEELGRLEESVKQKEAEVAHVDQLLENAVKAVDECEVLVKDVYVNL
GLEYRETDSDLENGFSKPMEVIEIPDEDDDDVMSVDSADPNNKIAKDQTLLREAMAAMRK
SAQDVQKFMDAVNKKTGSLDSHRGVCCTQLPFSGAQPTTGALPSFHSMMERAPNETSYRA
PVEKLFYLPHVCSFKCLSRVRPLRPDLHRSRNPLLIPLLYDFRRMTARRRINRKTGFHVI
YKTPCGLCLRSMNEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPFYYIADITKGQ
EDVPLSCVNEIDSTPPPQVAYSKERIPGKGVFINTGWEYLVGCDCEDGCRDKSKCACHQL
TVQATACTPGGQINYNSGYQHKRLEECLPTGVYECNKCCKCNLNMCTNRLVQHGLQVRLQ
LFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENS
KEGYESEAKYSSDSSGVNLKDEDDDNSGTEEAEESNEESSDDNFCKDEDFSTSSVWRSYA
TRRQTRGQRENGLSETASKDSGPARQASHEEAPAPCKPPVSEETSKNKVASWLSSNTVAD
GYPDSDSRSSFRMQEAAAEGKPPVKAEPGEGEKSRGASLPLTKDEPSPEGGEVKVVKKKE
EPDDPGKAAPSQPTRVYGYNPNPPIPEGARRPPSKTTSHQSRRQSEGQNPDQDVLMLSSS
TDSDGDNVRPAAEPIQVNHTNDSDDIQTISSGSEEETGADQKKNTPSRLGAVKRQVAVKS
TRGFALKSTHGIAIKSTNLASGENVAVRRNTRQFYDGEESCYIIDAKLEGNLGRYLNHSC
SPNLFVQNVFVDTHDLRFPWVAFFASK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgtgcgtgtttgtggcaagagtttctgaggacggcaacagggctgaccccccc
tcctctcccgcccccaggggagaaggttctgccgccatggcggagtcggaggacatccta
gagctccagcgggaggtgatggaggagatgggcatctccctggaggacctcaagcagctg
atcgaggaggagatggagaaatcggagtacatcaagcagcggaaggaggagctggggcgc
ctggaggagtccgtgaagcagaaggaggcggaagtggctcacgtcgaccagctgcttgaa
aacgccgtcaaggcggtggatgaatgcgaagttttggtcaaagacgtctacgtcaacctg
gggctggaataccgagagacggactcggatttggagaacggtttcagcaaacccatggaa
gtgatcgaaattcccgacgaggatgatgacgacgtcatgagtgttgactcagcagatccg
aataacaaaattgcaaaggaccagaccctgctccgagaagctatggccgccatgcggaaa
tcggctcaagacgtccaaaaattcatggacgccgttaacaagaagacgggcagcttggat
tcccacaggggtgtgtgctgtacacaattgccgttctccggagcgcaacccacgacgggt
gccctcccgtccttccacagcatgatggagcgggcccccaacgagacctcctaccgggcc
cccgtggagaagctcttctacctgcctcacgtctgcagcttcaagtgcctgagccgggtg
cggcccctccgtcccgacctgcaccgcagccgcaacccgctcctcatcccgctgctctac
gacttccgccgcatgacggcccgccggcggatcaaccggaagacgggcttccacgtcatc
tacaagacgccctgcggcctctgcctgcgtagcatgaacgagatcgagcgctacctcttt
gagacggactgcgacttcctcttcctggagatgttctgcctggacccctacgtgctggtg
gaccgcaagttccagccctacaagcccttctactacatcgcggacatcaccaagggccag
gaggacgttcccctctcctgcgtcaacgagatcgacagcaccccgccgccccaggtggcc
tacagcaaggagcggatcccggggaagggggtcttcatcaacaccggctgggagtacctg
gtgggctgcgattgcgaggacgggtgcagggacaagtcaaaatgcgcctgtcatcagctg
acggtccaggccacggcctgtactcccggcgggcagatcaactacaattccggctaccaa
cacaagcggctggaggagtgtctccccacgggagtgtacgagtgcaacaagtgttgcaag
tgtaatttgaacatgtgcacgaaccgcctggtccagcacggcctgcaagtccggctccag
ctcttcaagacccagaacaaaggttggggcatccgttgcctggacgacatcgccaagggc
tccttcgtctgcatctacgcggggaagatcctgacggacgactttgccgacaaggagggc
ctggagatgggggacgagtactttgccaacctggaccacatcgagagcgtggagaactcg
aaggagggctacgagagcgaggccaagtactcctcggacagcagcggcgtcaacctgaag
gacgaggacgacgacaactctggcacggaggaggccgaggagtcgaacgaggagagctcg
gacgacaatttctgcaaagacgaggatttcagcaccagctcggtctggcgcagctacgcc
actcgccgccagacgcggggccagcgggagaacggcctgtccgagacggcctccaaggac
tccggcccggccaggcaggccagccacgaggaggcccccgctccctgcaagccccctgtc
tcggaggagacctccaagaataaggtggcctcctggctgagctccaacaccgtggccgac
ggatacccggacagcgacagccgctcgtcctttcggatgcaggaggcggcggccgagggg
aagccccccgtgaaggcggaacccggggagggtgagaagagtcggggggccagcctcccc
ctcaccaaggacgagcccagcccggaggggggagaggtgaaggtggtgaagaagaaagag
gaaccggacgatccaggcaaagcagcgcccagccagcccaccagggtttacggctacaac
ccaaacccgcccatcccggaaggcgcccggcggccccccagcaagacgacctcccatcag
agtcggagacaatcggaaggccagaatccggaccaggacgtcctgatgctctccagcagc
accgacagcgacggagacaacgtccggccggccgcagagcccatccaggtcaaccacacc
aacgacagcgacgacatccagaccatctcgtccggctcggaggaagaaacgggcgccgac
cagaagaagaacaccccttccaggctgggagctgtgaagaggcaggtggccgtgaaatcc
acccggggattcgccttgaagtccacgcacggcatcgccatcaagtcgaccaacctggct
tcgggggagaacgtggccgtccggaggaacacgcgccagttttacgacggggaagagtcc
tgctatatcatcgacgctaagctggaggggaacctgggacgctacctcaaccatagctgc
agccccaacctcttcgtccagaatgtcttcgtcgacacgcacgacctccgctttccctgg
gtggccttcttcgccagcaagtaa
DBGET
integrated database retrieval system
