Thamnophis sirtalis (common garter snake): 106546455
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Entry
106546455 CDS
T06107
Symbol
TIAM1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04530
Tight junction
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106546455 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106546455 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106546455 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
106546455 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
106546455
NCBI-ProteinID:
XP_013918808
UniProt:
A0A6I9Y4E7
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MGNAESQSVEHQFYGEKHASLSRKHTSRSLRLSNKTVRRTRHASSGKIIHRNSEVSTRSS
STPSIPQSLADNCLESFTQESNLGDFGSPIWGDRMDMGLRPVSYHTDSSVTPSMDSSSAL
MAASVQSMPDSEGGRLYRDESTYLSEVGGRQHSYSTNGTTFLEPMTFKKKRSKSADIWRE
DSLEFSLSDLSQEHLTSNEEILGSPEEKDGEETPGREPSNSRQPLVTCQRANSMSDLYSP
KSSTVTINGGPRNMLGGYCRNIGSHIPDMENHKMSPNTVDNVSSYSTYNTLPCRKSHCLS
EGISHIKMNHSNSMHGRRAKTTQDVNTGDGSEFADSGIEGATTDTDLLSRRSNATNSSYS
PTTSRAFAGSDSGSSSTGDGARQGVYENFRRELELSSTNDNLDEAGSTLSDEQSSGTLSS
PGQSDILLTAGQGTVRKAGALAVKNFLVHKKNKKVELATRRKWKQYWVSLKGCTLFFYES
DGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDYVFCLSNSLGDAFLFQTSSQTELENWI
TAVHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMHFLSLSSVRDSKK
KKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKTLLAFASRPTKDAMGRLGI
FSVSSFHALVAARTGESGVRRRTQVMSRSASKRRSRFSSLWGLDTASKKKQGRPSINQVF
GEGTDSVKKSLEGIFDDTVQESKREKEVTLTTVHPHNPDSDMWVHEYFTPSWYCLPNNQS
ALTVIHPGDTARDVLEMICKAHQLDYSAHYVRLKFFIRNQMEYYIPKPEEDIYELLYKEI
EICEKITQQIHLEKSDTLDNYGFSLSSIEEEGIRRLHINSVKETGLAFKKGLKAGDEIVE
INKKAAEDLNSAMLRDVLVQPSLCLIVQTYPEKEAGQNRIHLPPRRIDDSFDSTDSPLKS
VCSTQGPLLSTDQDNCIEVSVEETEVNILESSEDSDKTSKSTEQVAAFCRSFHEMTPSDP
NVTLQESTGPQQSTTRQLTDADKLRKVICELLETECTYVKDLNCLMERYLKPLQKETFLT
QEELDVLFGNLTEMVAFQVEFLKTLEDGIRLVPDLEKLEKVDQFKKVLFSLGGSFLYYAD
RFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYP
LLLKELFTLTDADSEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGDKK
EVADLSMGDLLLHTTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKEGVKQKKKLGGS
HRASIYEDSDPFRFRHMIPLEALQVRALASADADTSSVCEIVHVKSESEGRPERSFHLCC
SSPDHRKDFLKAVHSILRDKHRRQL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcagagagtcaaagtgtagagcatcaattttatggtgagaaacatgctagt
ttgagccgaaagcatacatcacgttctcttcgcctttcaaacaaaacagtacgccggacc
agacatgcatcctcaggaaaaattattcacagaaactcagaagtaagcacaagatccagc
agtactcccagcatcccccaatcattagcagacaattgtttggagtcttttactcaagaa
tccaatttaggggattttggaagcccaatctggggggacagaatggatatgggcttgagg
ccagtttcttaccacactgattcttctgtcactccaagcatggatagcagttcagctctt
atggcagcctcagtacaaagcatgccagattcagaaggtggaagactctacagagacgag
tcaacatatttgtctgaagtaggtggtaggcaacattcttattcaacaaatgggaccaca
tttttggagcctatgactttcaagaaaaaacgttcaaagtctgcagatatctggcgggag
gacagtttggaattttctctgtctgatcttagtcaagaacatttgacaagcaatgaagaa
atcctaggatctcctgaagaaaaggatggcgaagagactccagggagagaacctagtaat
agtcgtcaacccttggtcacatgccagcgtgccaattccatgagtgacttgtattctcct
aaaagttcaactgttacaataaacggtggaccacgtaacatgctaggagggtattgtcgg
aatatagggtctcatatcccagatatggaaaaccacaaaatgtcaccaaacacagtggat
aatgtgtcgtcttatagtacttacaacacacttccctgtcgaaaatctcattgcctttct
gaaggaatcagtcacatcaaaatgaaccacagcaacagtatgcatggcagacgagcaaaa
acaacacaggatgttaatacaggagatggaagtgaatttgctgacagtggaattgagggt
gcaacgacagacacagacctcctttctagacgttcaaatgccacaaactccagctactca
ccaacaaccagccgagcctttgctggtagtgacagtggcagttcttcaactggagatggg
gcccgtcagggcgtctatgagaactttcggcgagagttggagttgagcagcaccaatgac
aatttggatgaggctggctctaccctgagtgatgaacagagcagtgggactttgagttct
ccaggacagtcagatattcttcttacagctgggcagggaacagtaaggaaggctggagct
cttgcagtgaaaaacttccttgtccataaaaagaacaagaaggtggagttagccacacgg
aggaaatggaaacagtattgggtttccctgaaaggttgtactttattcttctatgaaagt
gatggaagatctgggatagaccacaacagcatcccaaaacatgcagtctgggtggaaaac
agcatagtgcaagcagtacctgaacatccaaagaaagattatgttttttgcctcagcaat
tctcttggagatgcatttctctttcagacttctagccaaacagaattagagaattggatc
acagcagttcattctgcttgtgcaacagcagtagcacgacaacaccacaaagaagatacc
gtgaaactgttgaaaactgaaattaaaaaactggagcagaagattgatatggatgagaag
atgaagaaaatgggagaaatgcatttcctcagcttgtcttcagttagagactctaagaaa
aagaaaacgattcttgatcagatctttgtttgggaacaaaacttagaacagttccaaatg
gacctctttcgatatcgttgttacttagctagtcttcaaggaggggaactgccaaaccca
aaaacactacttgcatttgcaagtcgtccaactaaagatgcaatgggtcgtcttggaatc
ttttcagtgtcctcctttcatgcactggtggcagctcgcacaggtgaatctggtgtcaga
agacgaacacaggtaatgtcaagatcagcaagcaaacgaagaagccggttttcttctctt
tggggtttggacactgcttcaaagaaaaagcaagggaggccaagcattaatcaggttttt
ggtgaaggaactgattctgtaaagaaatctttagaaggaatatttgatgacactgtgcaa
gaaagtaagagagaaaaagaagtaaccctcactactgtccatcctcataatcccgactct
gacatgtgggttcatgagtattttacaccatcatggtattgtctgccaaataaccagtca
gctttgactgtcatccacccaggagacacagcaagagatgtcctggaaatgatttgcaag
gcacatcagttggattactcagctcactatgtccgtctcaaattcttcataagaaaccaa
atggaatattacataccaaagccagaagaagatatttatgaattgttatataaagaaatt
gaaatctgtgagaaaattacacagcaaattcatcttgaaaaatctgacacattggataat
tatggtttttctctatcctcaatagaagaagaagggattcgtcgtctccacatcaacagt
gtcaaagaaacaggtctggcttttaaaaaaggtctgaaagcaggtgatgaaattgttgaa
atcaataagaaggctgctgaagacctgaactcagccatgttaagagatgttcttgttcag
ccttctctgtgccttattgtacagacttatcccgagaaagaggcaggccagaatcgaata
cacttaccacctcggcggatagatgattcttttgactcgactgacagtccattaaaatct
gtatgcagcacccaaggacccttgctcagcactgatcaagacaactgtattgaggtatct
gtagaagagacagaagtgaacatcttggaatcctctgaagacagtgataaaacaagcaag
agtacagaacaggttgctgctttttgtcgcagttttcatgagatgactccatctgaccct
aatgtgacccttcaggaatctactggacctcagcaatccactacaagacagctaactgat
gctgataaactgcgcaaagttatttgtgaactgcttgaaacagaatgcacatatgtcaag
gatttaaattgtctaatggagagatacctgaaaccactacaaaaagaaactttccttact
caggaagagcttgatgttctctttgggaatctgactgaaatggtggcatttcaagtagag
tttttgaaaacgcttgaagatggaataagattggtgccagatctggaaaagcttgaaaaa
gttgaccagtttaaaaaagtgttgttttccttgggtgggtccttcctgtattatgctgac
cgtttcaagctgtatagtgccttctgtgcaagccacaccaaggttccaaaagtcctagtg
aaagctaagacagacacagcatttaaagcattcttagatgcccagaatcccagaagacaa
cattcatcaacattagagtcttacctcatcaaaccaatccagaggatattgaagtaccct
cttttgctgaaagaactatttactctcactgatgctgatagtgaagaacattatcacctt
gatgtggccataaaaacaatgaacaaggttgctagccatatcaatgaaatgcagaaaatc
catgaagaatatggagctgtgtttgatcagctcattgcagaacaaacaggagataagaaa
gaggtggcagatctttctatgggagatttgctactgcataccacagtcatctggcttaat
cctcctgcgtcacttggaaagtggaagaaggaacctgaactggcagcatttgtgttcaaa
actgctgtggtacttgtatataaagaaggagtgaaacagaagaaaaaattgggtggatct
catagggcttccatttatgaagactcagatccatttcgtttccgtcacatgattcccttg
gaggctttgcaggtccgagcattggcaagtgcagatgcagataccagttctgtctgtgag
atagttcatgtgaaatctgagtctgaaggcaggccagagaggtcattccatctttgttgt
agttcgccagatcacaggaaagattttctaaaagctgtgcattcaattttacgagacaaa
cacagaagacaactt
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integrated database retrieval system
