Thamnophis sirtalis (common garter snake): 106546962
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Entry
106546962 CDS
T06107
Symbol
NUP210L
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106546962 (NUP210L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106546962 (NUP210L)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106546962 (NUP210L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_16th
Ig_NUP210_8th
Ig_NUP210_14th
Ig_NUP210_6th
Ig_NUP210_3rd
NUP210_Ig
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_1st
Big_2
Motif
Other DBs
NCBI-GeneID:
106546962
NCBI-ProteinID:
XP_013919450
UniProt:
A0A6I9Y9X8
LinkDB
All DBs
Position
Unknown
AA seq
1735 aa
AA seq
DB search
MWAVSRPGRAPPPPLFLLAVALLAGPAGAYKLNVPKVLLPFSRDKRVPFVLGAEGGCYSW
SPVCGEYAEQECLIEPRFPTLETFDEVELPLEHYELELQDEVKAPNGFLFLPVAQLDTST
ATVTALQLGQVNLAFVHKNIHMRGSLGLPNCTIYVVEPGFLGFTVQPGNRWVLEVKRAYT
ITVEVFDKSSTKVYPSDNLRITHQFPQEYFEELTSSTNGSYHIVRVLKEGVTVIKAMLLS
VLLQWTWDFKKQQQQGMGGLEQGQTWILKYSEAEYSPPDYIVQMEKEEKQGDRILVSGIK
TGAAVIKVRIEEPVYKVVPVLPGSLALEVYDLCLAFLGPATAYLRVSNMYELEVDLIDKV
EIGKSVLVSVRVLGSHRSAFRSKYFAYMHLQLKAASPISGLEDYFVSPISHEQEMKIYLP
ITLTPSFLTFPYHSLDLLYRYKVQVEGGSGNFTWTSSNQSVATVTVKGVVAAGLTEGQSA
VQARDVQNPFHFGEIQVSVLKLSKMELLPFHADAEIGQNLEVPLAMYHVEKKTGAATAFT
DCSLLALDVTADKQGVFALSEEGKQKAGATFCSTIQLTAKSLGHTLVTASATVFEEYFET
SATFAAYEPLKAVNPVQLALVTWHSMKEMVFEGGPGPWVLEPSRFFLELKTDDEKKFQVA
EVRLPARRKQNQYIYRVTCLELGEQVFTFQVGNHPGVLNPSPAVEMVQLNFICAHPASMA
VTPVYKLAAGAPPCPLPQHHKQLVPVSSLRNTILELALFDQHRRKFDNFSSLILEWTSAN
ESLARFTHPRSMQMVDKDDGTGQTRLHGHQLLEVHQIKGTVLIAVNFVKYSERGSPKEVS
NSPASAAVELLLVEDVTVIPDNVTMYNHPNVKHSERDRPGPSPSQKGRPMEELGDYSEVY
MLRAVAVGQTTLVATAWDKTGVKFMSSPRKVEIFPPFRLLPEKMTLIPHNMWQVMSEGGP
QPQSLIHFSISNRTVAEVNGLGQVTAKAVGTAFILGTIRAVSEDTGKVIVFSQDQVEMEV
VQLRMIRIHAPATRLVTGTQMPVYVVGLTSTLTPFSFGNSRPPLTFHWAVSKRDILDLLP
RHSEISLALPPESNFAMGVRTRAAGRTSIRVAVRTSDAEAGQFEGNATELLDEVQILVFD
NLQLFSPECPAEQILMSMNSQLRLLTNRDGAAFVSTQILQCFPNSSVIEEDRHGLLKAGA
VTGTAVLEVTSLELFGVNQTVITGVRVAPVSYLQFSSTPKLYTAARTPLLAFPLGMALTL
TVRFFDSAGVRFHTQNNQLQLALNRDDLLLIRPSNQNYTYTAQAVNRGVTLVGVWDERHP
GMADYISVPVEHAIGPDLSAPLAVGDVVCFSTPLVNQEGEPGTWQVSPGGLLEMDVARGA
AFAKRPGKATVFHEIPGIVKTYREVVVHGPSRLSLQLGPKHFLTNAANASEFRVFITTSG
PATLQGPCSSEQIRAINDLLSPESQLICQLDFNPKILDIPASKIFHIRPAFYPEKGLYAC
LVTVKDHPDEDLLALSTAEGSVDISAALRSEEPQETQRVALPFLPAFFLNQSEIVLSSSQ
VTSEILVLGARRVTDTIEAHPTSPVVQVDPPLFLPDMPGLVLFPVRVVNLTSLHRRAAPV
FVNLSCGLTGQRAAVLVRPEQEHHLGFDLCAEASLVRQLVGSYQVLLFTVFAVLASTMVI
FLIYNAFLNRVQTVPLVYIPSASTQDGYLYPPLTAQHHPSSLRNRTQAWLWSVRR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggtttcccggccgggtcgggctccgccgcctccgcttttcctcctcgccgtg
gcgcttctggcggggccagcgggagcctataagctgaatgtgccgaaagtgttgttgccc
ttcagccgggataagcgggtgcccttcgtgctgggcgctgagggtggttgttattcttgg
agccctgtttgtggggaatacgctgagcaggagtgtttgatagagccacgatttccaact
ttagagacttttgacgaggtcgaattacctctggagcactacgagctggaactgcaggat
gaagtgaaggcgccaaatggctttctttttctcccggtggcccaactggacacaagtaca
gccacggtcaccgccctccagttgggccaggtgaatctggcctttgtccataagaacatc
cacatgcgaggatcgctaggccttccgaactgcaccatttacgtggtagaaccaggattt
ctgggcttcacggtccagccggggaaccgatgggtcttagaagtgaagcgggcatatacc
atcacagtcgaagttttcgataaatccagcaccaaggtctacccctccgataacctccga
ataactcaccagtttccccaggaatattttgaggagctcacatcttccacaaatggctcc
tatcacatcgttcgggtcctgaaggaaggcgtgacagtgattaaagccatgttgctctct
gttcttctccagtggacgtgggattttaaaaaacaacaacagcagggcatggggggtttg
gaacagggtcaaacctggattttaaaatactcagaggcggaatattccccgcccgactac
atcgtccagatggaaaaggaggagaaacagggtgacaggattttggtctcgggaataaaa
accggggcggccgtcatcaaggtccgaatcgaggagcctgtttacaaggtagttcccgtc
ctgcctggttctttggccctggaggtctacgatctctgcctcgcattcttaggaccggcg
acggcttacctgcgagtatcaaacatgtatgaactggaggtggatttgattgacaaggtt
gagattggcaaatcggtgctggtctcggtgcgagtgctgggctcccaccgttcggctttc
cgcagcaaatatttcgcctacatgcatctccagctgaaagctgcgtctccaatcagcggc
ttggaagattattttgtctcgcccatcagccacgagcaagaaatgaagatctacctcccc
atcacgctgaccccttccttcttaaccttcccctaccattctctggatctcttgtaccgc
tataaagtccaggtggaggggggcagcggcaacttcacctggacctcctccaaccagtcg
gtggccaccgtcaccgtcaaaggcgtcgtggccgcgggactcaccgaggggcaaagcgcg
gtgcaggccagagacgtgcagaatcctttccatttcggagagatccaggtgtctgtgctg
aagctgtccaagatggagctccttcccttccacgccgacgccgagatcggccagaacttg
gaggtgccgctggccatgtaccacgtggagaagaagaccggggcggccaccgccttcacc
gactgctcgctcctggccttggacgtcaccgcggacaagcaaggggtattcgccttgagc
gaagaagggaagcagaaagcgggtgccaccttctgctccaccatccagctcacggccaag
tccctaggccacacgctcgtcacggccagcgccaccgtcttcgaggagtacttcgaaacc
agcgccaccttcgcagcctacgagcccctcaaggccgtcaaccctgtccagttggccttg
gtgacctggcattccatgaaggagatggtctttgagggagggcccggtccctgggtttta
gagccatcccgtttcttcctggagctgaaaacggacgacgagaagaaattccaggtggcg
gaggtccggctgccggctcggaggaagcagaaccagtacatttaccgagtcacctgcctg
gaattgggggaacaggtcttcaccttccaagtgggcaaccaccccggagtgctcaatccc
agcccggctgtggagatggtgcaactcaacttcatctgtgcccacccagccagcatggcc
gttacccctgtgtacaagctggccgctggtgccccgccgtgccccttgcctcagcaccac
aagcagctggtccccgtgtccagtttgaggaacaccattctggagctagctttgtttgac
caacaccggagaaagtttgacaacttttcttctctgatcctggagtggacctcggccaac
gaaagcttggctcgcttcactcacccgagatccatgcagatggtggacaaggatgatggg
actggacagactagactccacggacaccagctgctagaggtccatcagatcaaagggaca
gtcctgattgccgtcaactttgtgaaatattccgagagaggcagcccgaaagaggtctct
aactctcccgcttctgcagccgtggagctcttgctggttgaggatgtgacggtgatcccc
gataacgtcaccatgtacaaccatcccaatgtaaagcattctgaaagagatcggccgggc
ccctctccaagccagaaaggtcggccaatggaggaactcggcgattattccgaagtctac
atgctccgagccgtggcagttgggcagacgaccttagtggccacagcttgggacaaaaca
ggagttaaattcatgtcctcgccacggaaagtggagattttcccccctttcaggctgctc
cccgaaaaaatgaccctcatcccccacaacatgtggcaggtgatgtcggaagggggtccc
cagcctcaatccctgatccacttttcgatcagtaaccgaaccgtggccgaggtaaacggg
ctgggacaagtcacggccaaggcggtgggcaccgcctttatcctgggcaccattcgcgcc
gtcagtgaagacacgggaaaagttattgtcttctcccaggatcaagtcgagatggaagtg
gtgcagctgcggatgattcgaatccacgccccggccactcgactcgtcactggcacccag
atgcctgtgtatgttgtgggcctgaccagcaccctgactcccttctccttcgggaactct
cgtccacccctcaccttccactgggcagtgagcaagcgggacatcttggacctcctcccc
agacactcggagatttcgctggccctccctccggagagcaatttcgccatgggggtccgg
accagagccgcgggcaggaccagcatcagggtggcggtgcggacttcggacgccgaagcc
gggcagtttgaagggaacgccaccgaactcctggacgaggtgcagatcctggtcttcgac
aaccttcagctcttctctccagagtgccccgcggagcagatcctgatgtccatgaattcg
cagctcaggttgcttacaaacagggacggggctgcctttgtcagcacccagatcctgcag
tgcttccccaattcctcggtcatcgaagaggacaggcacggcctcctgaaggccggagcc
gtcacggggacggccgttctggaggtgacctctctggagctcttcggcgtcaaccagacg
gtcatcacgggtgtgcgggtggccccggtctcttacctgcagttcagcagcaccccaaaa
ctctacaccgccgcccggacgcccctgctggcgtttcccttgggcatggccctgactctc
accgttcggttcttcgacagcgccggggtcaggtttcacacccagaataaccagctgcag
ctggccttgaacagggatgacctcttgctgatccggcccagcaaccagaactacacttac
accgctcaagccgtgaaccgaggcgtgacgctggtgggggtttgggacgagaggcacccg
ggcatggccgattacatttccgtccccgtggaacacgccatcgggcccgatctctccgcc
cccctggctgtgggggacgtggtctgcttcagcacacccctggttaatcaggaaggggag
cctggcacctggcaggtcagccccggcggcctgcttgagatggacgtagcgaggggagcg
gcgttcgccaagcgcccgggaaaagccaccgtcttccacgaaatcccagggatagtcaaa
acgtaccgagaggttgtcgttcacggcccgtcgaggctcagccttcagctggggcccaaa
cacttcctcaccaatgcagccaacgcctctgaattccgggtctttatcaccaccagcggc
ccggccactcttcaaggtccttgtagttctgagcaaattcgggccatcaacgacctccta
tctccggaatcccagctgatctgccaactggatttcaaccccaagatcctggatattcca
gccagcaaaatatttcacatccggccggcattttacccggagaaagggctctacgcttgc
ctggtgacggtgaaagaccaccctgacgaggatctgctggccctcagcaccgccgagggc
tccgtggacatctcggccgctctccgcagtgaggaaccccaggagacacaacgggtggct
ctcccctttctccccgccttcttcctcaaccagagcgagattgtcctgagcagttcccag
gtgaccagcgagatcttggtcttgggcgcccggagagtgacggacaccatcgaggcccat
cccacttctcccgtggtgcaagtggatccccccctcttcctcccggacatgcccgggctt
gtcctcttccccgtccgcgtggtcaacctgacctccctccaccggagggcagcacccgtc
ttcgtcaacctctcctgcggcctcaccggccagcgagcggctgtgctggtgcgtcccgag
caggagcatcatctcggctttgatctgtgcgccgaggccagtctcgtccggcaactggtg
gggtcctaccaggtcctcctcttcaccgtcttcgccgtcctggcgtccaccatggtcatc
tttctcatttacaatgccttcctgaacagagttcagacagtcccactggtctacatcccg
tcggcctcaacgcaggacggctacctctaccctccgctgactgcccagcaccatccttcc
agcctgaggaacaggactcaggcctggctctggagcgtgcggagatga
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integrated database retrieval system
