Thamnophis sirtalis (common garter snake): 106547521
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Entry
106547521 CDS
T06107
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106547521 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tsr03310
]
106547521 (NR1H4)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106547521 (NR1H4)
Nuclear receptors [BR:
tsr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
106547521 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106547521
NCBI-ProteinID:
XP_013920207
UniProt:
A0A6I9Y0A5
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All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MASEMNLINHPQLSSADGFPLSEGPSLFDLSSPSWCPQDVLDYSCHLAPISIGIHPDPMI
STAKDTDVSSYSQYNTMHFCPMQPPITLPPYYSSFSLHPQQSEEWHSPVMYELEKMPSNN
LQTKETDLVDFPVAKKSRMGLLSGRTKDKELCVVCGDKASGYHYNALTCEGCKGFFRRSI
TKSAQYKCKNGGNCEMDMYMRRKCQNCRLQKCKAVGMLAECLLTEIQCKSKRLRKNTPQP
PENTISEDPERFDLKQVSSTTKLCKEKVKLSSEQQNLLRYIMDSYNKQRIPPEVTKKLLQ
EDFSAEENFLVLTEMATSHVKMLVEFTKRLPGFQILDHEDQIALLKGSAVEAMFLRSAEI
FNRKLPRGHADLLEERIRNSGISDEYITPMFHFYKSIGELKMTQEEYALLTAIVILSPDR
QYIKDRDSVERLQEPLLEVLQTFCKLHHMDSPQHFACLLGRLTELRTFNHHHADMLMSWR
VNNHKFTPLLCEIWDVQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagagatgaacctgatcaaccatccccagctatcttcagcagatggatttcct
ctttctgaaggtcctagtttatttgacctatcttctccttcctggtgtcctcaagatgta
ttagactacagctgtcatcttgccccaatcagcataggtatacatccggatccaatgatt
tctacagcgaaagatactgacgtgtcatcctactcacagtacaacactatgcatttttgc
ccaatgcagcctccaatcactttaccaccttattattcaagttttagtcttcatcctcaa
caatctgaagaatggcactcccctgtaatgtatgaacttgaaaaaatgccatctaataac
ttacaaaccaaggagacagatctggtagactttcctgtagccaagaaatctcggatgggt
ctactctctggaagaacaaaagataaagagctgtgtgttgtctgtggtgacaaggcctct
ggatatcattataatgccctgacttgtgaaggctgcaaaggtttcttcagaaggagtatc
actaaaagtgctcaatacaagtgtaaaaatggaggaaactgtgagatggacatgtatatg
aggagaaagtgtcagaactgccgtctacaaaagtgcaaagcagtaggaatgctggcagaa
tgtttgttaactgaaatccaatgcaagtcaaaacgactaagaaaaaacacgccacagccc
ccagagaacactattagtgaagatcctgagagatttgacctgaagcaagtgtcatctaca
actaaattgtgtaaggagaaagtaaaattaagctcggaacaacagaatcttcttcgttat
ataatggattcctataataaacagcggatacctcctgaagttaccaaaaaacttttacaa
gaggacttcagtgcagaagaaaattttcttgttttaacagaaatggccactagccatgtt
aaaatgcttgtggagttcactaaaagattaccaggttttcaaatcctggatcatgaagat
caaattgctttgttgaaaggttcagcagtagaagccatgttccttagatcagctgaaatc
tttaacaggaaacttcctagaggacatgctgatctcttagaagaacgaattcgcaacagt
ggtatctcagatgaatacataacgcctatgttccatttctataaaagtattggggaactc
aagatgacacaagaagaatatgctctgcttacagcaatcgttatcttatcaccagatcgg
caatacataaaggatagagactctgttgaacggcttcaagagcctctccttgaagttctg
caaacattctgcaagcttcatcacatggatagtcctcaacattttgcttgtctccttggt
cgccttacagaattacggacttttaaccaccatcatgcagatatgttgatgtcatggaga
gttaacaatcacaaattcacacctcttctttgcgaaatatgggatgtgcagtga
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integrated database retrieval system
