Thamnophis sirtalis (common garter snake): 106548178
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Entry
106548178 CDS
T06107
Symbol
TRPM4
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106548178 (TRPM4)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106548178 (TRPM4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
ARM_ARMC5
MBOAT_2
DUF2204
Motif
Other DBs
NCBI-GeneID:
106548178
NCBI-ProteinID:
XP_013920988
UniProt:
A0A6I9Y6T2
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MATSDHKDQAWIPKYFKKKVCTTFIEQPSDIGASDFCQCGSPRKNHTSVAIEDAFGAAIV
SKWDSAQHTTERPTDAYGEVEFLSTGRRPSKFIRLSDSSDPANAYALVTHHWKIPHPNLV
VSVVGGEGEGPVRAWLKDVLRKGLVKAAQSTGAWIMTSGLQDGVGRYVGEAVRDHAMAST
SRSTHVVAMGIAPWGIVEQHHSLVNPKGSFPARYPRTNPVSPFCPLDANHSAFFLVDNGT
LGRAGGEAAFRARLERYIAQQKVGAGGEGSIEIPVLLLLISGDSAIFKRVSEAVHASIPC
LLVAGSGGAADCLAELLEETQPGESLKTLAMKKMQGKFPHHDLEELAEQVESIGNLRELV
TVYSDQEGLEEFETVLLKALVKACKRSSKATCYLDELRLAVAWNRVDIASTELFRGDILW
EPSLLENPMRDALLGNRTDLVRLFVENGLDVGQFLTWGKLEQLYAGSPKVSLLRQLLERC
QGTGSEPSSPPEDVLLERSLPDCHLSHVALILHELLGDVCAPFYAGLYPIGHRGIGKKGL
LANGDSSYQNERSPNPWTDLFIWAVLLNRKEMAIYFWEMAPDAVAGALAAAKILRELSHL
ETETEEVAALKDLAMHFENLAIGVFSECYRNSEPRAYKLLVRCSHLWVGATILHLAHQAD
ARFFFAQDGVQSLLTQNWWGEMDRSTSVWKLLLTFFCPPLIFTELITFRSMEDDLQLDSL
EQLELDSLDTDVKSTIGDMLSESLEPPFPLSVRQLWLRRWHQFWVAPVTAFLSNVVMYLL
FLFLFSYVLLLDFDPPPPKGPSGTEIVLYIWVFTLVCEEVRQGCFVGSQPLLQRVRKYFL
DTWNQFDITALLLFMVGLVCRLFPSSYESGRTILCLDFMIFTLRLIHIFAVNKQLGPKMI
IVGRMMKDVFLFLFFLGVWLVAYGVTTEGLLLPHDRRIPWIFRRVFYRPFLQIFGQIPLS
EIDATQITASNCTYDPLAILIEDANPCTNTYANWLVLILLVIFLLVANILLLNLLIAMFS
YTFSKVQDNSDIYWKSQRYNLILEYHSRPALAPPFILISHLHLLFKRHIRKVPSAKRRDF
LLELSEIQNRRLLTWESVQKENYLVTQARQKRDSDTERLRRTSQKVDQVLKQLSDIKESE
RHLKNLEIQMEYCTSTLSWMVDILAQSDLAKGKQVPPIQKKD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggccacttccgaccataaagatcaggcatggatccccaaatatttcaagaagaaagtc
tgcacaactttcattgagcaacctagtgatataggtgcctccgatttctgccagtgtggc
agccctcgcaaaaaccatacatcagtagccatagaagatgcttttggagcagccattgtc
agcaaatgggactcagcacaacataccacagagaggccaacggatgcatatggggaggta
gaatttctaagcactggccgtagaccaagcaagttcattcgcctctctgactcatctgat
cctgcaaatgcttatgctttagtaacgcatcactggaaaatcccacaccccaacttggtg
gtgtcagtggtgggaggtgaaggtgaggggcctgtaagggcctggctcaaagatgttctg
agaaaggggctggttaaagcagctcaaagcacaggtgcctggattatgacaagtggtctc
caagatggtgtcggccggtatgtgggggaagcagtgagagaccatgctatggccagtacc
agccgcagcactcatgttgtagcaatgggcattgctccatggggtatcgttgaacagcac
cattctcttgtgaaccccaagggttccttcccagcacgttaccccaggacaaaccctgtg
agccctttctgccctctagatgccaaccattctgccttcttcttggtggacaatgggaca
ctggggagagcaggcggagaggccgccttccgagcccgtttggaacgctatattgcccag
cagaaagtgggagctggcggtgaagggagcattgagattcctgtgttgctgctgctcatc
agtggggactcagccatattcaagcgtgtatcagaggctgtgcatgcctccattccctgc
ctcctcgtagctggatctgggggagcagcagactgcttggctgagttgttggaagagaca
caacctggagagtccttgaaaactctggcaatgaagaaaatgcagggaaaattcccacac
catgacttggaggagttggctgagcaggtggaaagcattgggaatctgagggagttggtg
actgtctattcagaccaagaaggtttggaagagtttgagactgtcctgcttaaagctcta
gtgaaagcatgtaagcggtcaagcaaggccacctgttatctggatgagctacgcctggcg
gtagcctggaatcgggtggacattgccagcacagaattgttccgtggggacattctctgg
gagcccagcctgctggagaacccaatgcgtgatgcattgctaggtaatcgaactgactta
gtgcgcctctttgtggagaatggcttggatgtaggacagttcctgacatggggaaagctg
gaacagctgtatgctgggtcccccaaggtctcgctgctgcgccagcttttggagcgatgc
caagggacaggctctgagccatcctcccctcccgaagacgtgctgctggaacgatctttg
cccgattgccatttatctcatgtggctcttattctgcacgagctactaggggatgtctgt
gctcctttttatgcaggactataccctattggccacagagggatagggaaaaaaggatta
ttagcgaatggagattcctcctaccaaaatgaacggtcaccaaacccatggactgaccta
tttatctgggcagtgttgctgaatcgaaaagagatggcaatttacttctgggaaatggca
cctgatgcagtggctggggcattggcggcagcaaaaatactgcgggaactttcacatcta
gagacagagacagaggaagtggcagccctgaaggatttagcaatgcactttgaaaacttg
gccataggagtattcagtgaatgttaccgtaacagtgagccacgggcctacaaactactg
gtgcgctgttcccacctctgggttggagccactatcctccatctggctcaccaggctgat
gcccgtttcttttttgcacaggatggtgtccagtccctgcttacccaaaactggtgggga
gaaatggaccgaagtacttctgtctggaagctacttctcacatttttttgcccccctctc
atctttactgaactcattacattcaggagcatggaggatgatctgcagctggattccttg
gaacagcttgaattggacagtcttgatacagatgtgaaaagtaccatcggagacatgttg
tctgaaagtttggaacctccattccctctttctgttcgacaactgtggttacgacgatgg
catcaattctgggtggcacctgtgacagcattcctgagcaatgtggtgatgtacttgctc
ttcctcttcctcttctcctacgttctgctgctggattttgaccctccacctcccaaaggt
ccatctggaactgagatagttctgtacatctgggtcttcacactagtctgtgaagaggtg
cgtcaaggatgttttgtgggatcccaacctttgttgcagagagtacggaagtacttcctg
gacacatggaaccagtttgatatcacggccctgctactcttcatggtagggctagtgtgc
aggctgtttccttcatcatatgaatcaggacgcaccattctgtgcctggatttcatgatc
ttcacacttcgtctcatccacatctttgcagtcaacaaacagttggggcccaagatgatt
atcgttggcaggatgatgaaggatgtatttctgtttctcttctttcttggagtgtggttg
gtagcctatggggtcacgactgagggtctcctcctcccccacgatagaagaatcccttgg
atatttcgacgtgttttctaccgacctttcttgcaaattttcggacagatcccactcagt
gaaattgatgctacccagattacagcctcaaattgcacctatgaccctttagccatcttg
attgaggacgcgaacccttgtaccaatacctatgctaactggctggtgctcattcttctt
gtgatcttcctgctggtagccaatattctgctcctcaacttgctgattgcaatgttcagt
tacacgttctccaaagtgcaagacaacagtgatatttactggaaatcacagcgttataac
cttatcttagagtatcatagtcggcctgctttggctccacccttcatcctgatcagccac
ctacatcttttgttcaagcgtcatatccgcaaggtgccgtcagcaaagaggcgtgacttc
ttgctagaactctctgagatccaaaatagacgactactgacgtgggaatcggtacagaaa
gaaaattacttagtaacccaggctcgacagaaacgtgacagcgacactgagcgactccgg
agaacttcccaaaaagtcgatcaggttttaaagcagctttctgatatcaaagaatcagag
cgacatctgaagaaccttgaaattcagatggagtattgtaccagtaccttgtcttggatg
gtagatatcttggcccagagtgacctagcaaaaggaaaacaagttccacctattcagaaa
aaagattga
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