Thamnophis sirtalis (common garter snake): 106548334
Help
Entry
106548334 CDS
T06107
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00280
Valine, leucine and isoleucine degradation
tsr00650
Butanoate metabolism
tsr00900
Terpenoid backbone biosynthesis
tsr01100
Metabolic pathways
tsr03320
PPAR signaling pathway
Module
tsr_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
106548334 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106548334 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106548334 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106548334 (HMGCS1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
106548334 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
106548334
NCBI-ProteinID:
XP_013921161
UniProt:
A0A6I9Y347
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MYACAVRGSRRLPEPAVGFHCGYTNMPGSLPVNAEACWPKDVGIVALEIYFPSQYVDQVE
LEKFDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTAVQKLMERNSLSYDCIGRLEVGTE
TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWVESSSWDGRYALV
VAGDIAVYATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPV
VDGKLSIQCYLNALDRCYNVYRKKIHAQWQKEGIDKDFTLNDFGFIIFHSPYCKLVQKSV
ARLLLNDFLNEPTLSKENDIYNGLEAFRDLKLEDTYFDRDVEKAFMKASSEIFSQKTKAS
LLVSNQNGNMYTPSVYGCLASLLAQYSPQQLAGQRIGVFSYGSGFAATLYSIKVSQDATP
GSSLDKIIASLTDLKARLDSRKCISPEIFAENMMLREKTHHLANYIPQCSVDDLFEGTWY
LVRVDEKHRRTYARRPMLGDRPLEAGVEVHLNLAGEHIPSPAKKVPRIPAKMDTEAVAVT
LSNGEH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcatgcgcggttaggggctcgcggcgtctgccggagccggcggtgggattccac
tgcggatacaccaatatgcctggatccctacctgtgaatgctgaagcctgttggccaaaa
gatgtgggaattgtagctttggaaatctattttccttcccagtatgttgaccaggtagag
ttagagaaatttgatggagtggatgcaggcaaatacaccattggcttgggacaatccaag
atgggcttctgctctgacagggaggatatcaattcactctgcctcactgcagtccagaag
ctgatggagcgcaatagcctgtcctatgattgcattggaagacttgaagttggaacggag
acgatcattgacaaatccaaatctgtaaagacagtcctgatgcagctctttgaagaatct
ggtaacacagatgtggagggcattgacacaacaaatgcatgttatggaggcacagctgca
ctcttcaatgccattaactgggtggaatctagttcctgggatgggcgttatgcacttgtt
gttgctggagacatagctgtatatgccactgggaatgccagaccaactggaggagctggt
gctgttgctatgcttgtgggtccaaatgcacctctcatttttgaacgaggattgcgtgga
actcacatgcagcatgcatatgacttttataaacctgatatggtatctgagtatcctgtg
gtagatggcaagctttccatacaatgctacctcaatgcactggatcgctgttacaatgtc
tatcgcaagaaaatccatgcccaatggcagaaagagggaattgacaaggacttcaccctg
aatgattttggcttcataatctttcattctccatattgcaaacttgttcagaaatctgta
gcccgcctgctgctgaatgactttcttaatgagccaacactctcgaaagaaaatgacatt
tacaatggcctggaagcatttagagatctaaaactggaagacacctactttgacagagat
gtggaaaaagcttttatgaaggctagctctgaaatcttcagccaaaaaaccaaggcttct
ttgcttgtctctaatcaaaatggaaatatgtatacaccatctgtttatggctgccttgct
tctctgttagcccagtactctccacagcaactggcaggacaaaggattggagttttctca
tacggttctggttttgctgctaccctctactccatcaaggttagccaagatgcaactcca
ggctcttctctggataaaataatagcaagcctgactgatttgaaagcaaggcttgattca
aggaaatgtatctcaccagaaatatttgctgaaaacatgatgctgagagaaaaaactcac
cacttagcaaactacatcccccagtgttcagtggatgatctttttgagggaacatggtac
ttagtacgagttgatgaaaagcacagaaggacatatgcccgtcgtcccatgctgggtgac
agacctctggaagcaggagtggaagttcatctgaacctggctggcgagcatattcccagc
cctgccaagaaagtaccacgaattcctgcaaaaatggacactgaagcagttgctgttacc
ctttctaatggggaacattaa
DBGET
integrated database retrieval system
