KEGG   Thamnophis sirtalis (common garter snake): 106548496
Entry
106548496         CDS       T06107                                 
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03082  ATP-dependent chromatin remodeling
tsr04145  Phagosome
tsr04210  Apoptosis
tsr04510  Focal adhesion
tsr04520  Adherens junction
tsr04530  Tight junction
tsr04810  Regulation of actin cytoskeleton
tsr04814  Motor proteins
tsr04820  Cytoskeleton in muscle cells
tsr05100  Bacterial invasion of epithelial cells
tsr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106548496
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106548496
  09143 Cell growth and death
   04210 Apoptosis
    106548496
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106548496
   04520 Adherens junction
    106548496
   04530 Tight junction
    106548496
  09142 Cell motility
   04814 Motor proteins
    106548496
   04820 Cytoskeleton in muscle cells
    106548496
   04810 Regulation of actin cytoskeleton
    106548496
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106548496
   05100 Bacterial invasion of epithelial cells
    106548496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsr03021]
    106548496
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106548496
   03036 Chromosome and associated proteins [BR:tsr03036]
    106548496
   03029 Mitochondrial biogenesis [BR:tsr03029]
    106548496
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tsr04812]
    106548496
   04147 Exosome [BR:tsr04147]
    106548496
Transcription machinery [BR:tsr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     106548496
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     106548496
Chromosome and associated proteins [BR:tsr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     106548496
    NuA4 complex
     106548496
  Chromatin remodeling factors
   BAF complex
    106548496
   PBAF complex
    106548496
   GBAF(ncBAF) complex
    106548496
   SWR1 complex
    106548496
Mitochondrial biogenesis [BR:tsr03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    106548496
Cytoskeleton proteins [BR:tsr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     106548496
Exosome [BR:tsr04147]
 Exosomal proteins
  Proteins found in most exosomes
   106548496
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 106548496
NCBI-ProteinID: XP_013921350
UniProt: A0A6I9YB60
LinkDB
Position
Unknown
AA seq 375 aa
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagaagaaattgcagcacttgtcattgacaatggttctggaatgtgcaaagcaggc
tttgctggagatgatgctcctcgggctgtgtttccctcaattgttggacgccctcgccac
cagggagtcatggttggtatgggacagaaagacagttatgtgggagatgaagcccaaagc
aagagaggtatcctgaccctgaaatatcccattgaacacggaattgtcaccaactgggat
gatatggaaaaaatttggcatcatactttctacaatgagcttcgtgttgctcctgaagaa
cacccagtactgcttacagaagctcctttgaaccctaaggccaacagagagaaaatgaca
cagatcatgttcgagacattcaacactccagccatgtatgtggccatccaggctgtgttg
tccctgtatgcttctggtcgtaccactggtattgtaatggactctggtgatggtgtcaca
cacactgtgcccatctatgagggttatgctctccctcatgccatcttgcgacttgatttg
gctggccgtgacctcacagactacctcatgaagattctgacagagagaggctacagtttc
accaccacagctgaaagggaaattgtgcgtgacataaaagagaagttatgttatgttgcg
ttggacttcgaacaggagatggctactgctgcttcctcttcctccttggaaaagagctat
gaattgcctgatggccaggtgatcacaattggaaatgagaggtttaggtgtcccgaagcc
cttttccagccttctttcttaggtatggagtcctgtggcattcatgagactactttcaat
tctatcatgaagtgtgatgtggatatcagaaaggacctatatgccaacacagtattgtct
ggtggtaccacaatgtatcctggaattgcagacagaatgcagaaggaaatcacagcactg
gctcccagtacaatgaagatcaagattattgctcctcctgagcgcaaatactctgtctgg
attggtggatccattcttgcatctctctctaccttccagcagatgtggatcagcaagcaa
gaatatgatgagtctggcccatctattgtccaccgtaaatgcttctaa

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