Thamnophis sirtalis (common garter snake): 106550511
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Entry
106550511 CDS
T06107
Name
(RefSeq) putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8
KO
K06856
immunoglobulin heavy chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04020
Calcium signaling pathway
tsr04145
Phagosome
tsr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106550511
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106550511
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106550511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106550511
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Opsonins
106550511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
Ig_2
HET-s_218-289
Rep_N
Motif
Other DBs
NCBI-GeneID:
106550511
NCBI-ProteinID:
XP_013923916
LinkDB
All DBs
Position
Unknown
AA seq
150 aa
AA seq
DB search
KRKKKGKAIGFLASPLFVLLLICNVYQQLLSFFSQAVLSNLKLAESGPGVVRPGDVLNLV
CKVTGASISVSNEWHWMRDSPEKGLEWVSAINVHSGNKWYAASLKNRATISADETRNEFY
LQIESVTAADSSVYFCTRLCTMRQKLLGLC
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
aaaaggaaaaagaaaggaaaggctattgggtttctagcatctcctctttttgtgcttcta
ctaatttgtaatgtttatcaacaactgttgtcttttttttcccaagcggtcttatcaaat
ctcaagctggctgaatctggaccaggggtggtgagacctggagatgttctcaacttagtt
tgcaaagtgacaggtgcctccatctctgtgtctaatgaatggcactggatgagagactct
cctgagaagggcctggaatgggtctcagccataaatgtccacagtggaaacaaatggtac
gccgcctctctgaaaaaccgagccaccatttccgcagacgagaccagaaatgaattctac
ctccagatcgagtccgtgacagctgctgactcatcggtgtatttttgtacccggctctgc
acaatgagacaaaagctattggggctgtgttaa
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integrated database retrieval system
