KEGG   Thamnophis sirtalis (common garter snake): 106551112
Entry
106551112         CDS       T06107                                 
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DRB1-10 beta chain-like
  KO
K06752  MHC class II antigen
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04145  Phagosome
tsr04514  Cell adhesion molecules
tsr04672  Intestinal immune network for IgA production
tsr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    106551112
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106551112
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    106551112
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106551112
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsr04147]
    106551112
Exosome [BR:tsr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106551112
  Exosomal proteins of epithelial cells
   106551112
  Exosomal proteins of breast milk
   106551112
SSDB
Motif
Pfam: C1-set SfLAP QcrA_N DUF202 ig Psg1
Other DBs
NCBI-GeneID: 106551112
NCBI-ProteinID: XP_013924600
UniProt: A0A6I9YLF5
LinkDB
Position
Unknown
AA seq 134 aa
MHPASLNTILLSTVMGFYRMEIEVRWLKNGQLEKEGVAFGGLLQNGDWTYQLQVMLETQP
QRGGDDYTCKVEHTTLEAPITVQWELRSSSSARSKLWTGIMGVVIGVAFLAVGLFSYLKS
KKATPTQPPAALMN
NT seq 405 nt   +upstreamnt  +downstreamnt
atgcaccccgcttccctcaacaccatcctcctctccaccgtgatgggcttttaccgcatg
gagatcgaggtccggtggctgaaaaatgggcagctggagaaggagggcgtggcctttggg
gggctgctccagaacggagactggacttaccagctccaggtgatgctggagacccaaccc
cagcgggggggggacgactacacttgcaaagtggagcacaccaccctagaggcccccatc
actgtccagtgggaactccgttcctccagctctgccaggagcaaactctggacggggata
atgggggtcgtgataggagtggccttcctggctgtgggactcttctcctacctgaagagc
aagaaagcaactcccacccaaccacctgcagcactcatgaattaa

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