Thamnophis sirtalis (common garter snake): 106551147
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Entry
106551147 CDS
T06107
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00514
Other types of O-glycan biosynthesis
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106551147 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106551147 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106551147 (RFNG)
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
106551147 (RFNG)
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106551147 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
106551147
NCBI-ProteinID:
XP_013924648
UniProt:
A0A6I9YJU9
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MAVEYDKFIESGRKWFCHVDDDNYVNVRMLVKLLSSYAHTQDIYIGKPSLDRPIQATERI
SENKMHPVHFWFATGGAGFCISRGLALKMSPWASLGSFISTAERIRLPDDCTIGYIIEGL
LEVKLLHSPLFHSHLENLQRLRGRAALRQVTLSYGGPENKHNVVSVGEVFSIQQDPTRFK
SVHCLLYPETLWCPTVTVK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaatatgacaagttcattgaatccggacggaagtggttttgccacgtggac
gatgacaactacgtgaatgtccggatgttggtcaaactgctctccagctatgctcacacg
caggatatctacattgggaagcccagtttggacaggcccatccaggccaccgagagaatc
agcgagaacaagatgcatccggtccacttctggtttgccacaggtggtgctggattttgc
atcagcagaggcctggccctcaagatgagcccatgggctagccttggcagcttcatcagc
actgcagagagaattcgcctccctgatgattgcaccattggctacatcattgaggggctc
ttggaagtgaaactgttgcacagccctttattccactctcatctggaaaacctacagcgg
ctgcgtggtagagctgcactcagacaagttaccttgagttatggtggccctgagaataaa
cacaatgttgtcagtgtgggtgaagtattcagtatacaacaagatccaactcggttcaaa
tctgttcactgcctcctctaccctgaaacactgtggtgtcctaccgtaacagtgaaatga
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integrated database retrieval system
