Thamnophis sirtalis (common garter snake): 106551336
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Entry
106551336 CDS
T06107
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04081
Hormone signaling
tsr04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
106551336 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
106551336 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106551336 (RAPGEF4)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106551336 (RAPGEF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
RasGEF
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
106551336
NCBI-ProteinID:
XP_013924904
UniProt:
A0A6I9YLJ7
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MVAVHTSHSSSSTEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESVLDN
TPRHATIVTRENSELLRIEQKDFKALWEKYRQYMSGLLAPPYGAMETGSNNDRMPDKENM
SNSSLCSISKNSNKVPSEKILRAGKVLRNTILSRAPHMIRDRKYHLKTYRQCCVGTELVD
WIMQQSSCVHLRTQAVGMWQVLLEEGVLNHVDQEQYFQDKYLFYRFLDDEHEDAPVMPTE
EEKKECDEELQDTILLLAQIGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLST
TVKQELAGFLVFESHPKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFG
KLALVNDAPRAASIVLREENCHFLRVDKEDFNRILRDVEANTVRLKEHGQDVLVLEKVPA
GNRPFNQGNPQPLQHKYIVMSGTPEKILEHFLETMRLESTLNEGMDAGVNDFVTMHCVFM
PNNQLCPALMAHYHAQASQGTEQEKLDYALNNKRRVVRLVLLWAAFYGDVLPEEEAAVAF
LEEFYVSVSDDARVITMLKEQLPELEKTVKQISEEAKGPQKKHKVLLQHFNMSDERTQKR
QPIRGSDEILFKVYCVDHTYTTIRIPVLSSVKEVLSAIADKLGSGDGLILVKMSSAGVEG
SSVYRKEENCKEYKNLNSFLALIMGLSNVAVSRLTMTWEKLPSKFKKIYAEFESLMDPSR
NHRAYRLTVAKLEPPIIPFMPLLIKDMTFTYEGNKTFIDNLVNFEKMRMISNTIKTVRFC
RSLPFSPDASQANKNHQDLRGYVRQLNVIDNQRTLSQMSHRLEPRRT
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgttcacacttctcattcttcctcctccaccgagtggatcgcttgcttggat
aaaagacctttggagcgttcaagtgaagatgtggatattatatttactcgcctaaaagaa
gtaaaagcttttgaaaaatttcatcccaatcttctccagcaaatatgtctctgcggctat
tatgaaaacttggaaaagggtattacattatttcgtcaaggtgatattggaacaaattgg
tatgctgtgttgacaggatccttggatgttaaagtttctgatacgagcaaccatcaggat
gctgtgacaatatgcaccttgggaatagggacagcgtttggagagtcggtcttggataac
acccctcgtcatgctaccattgttacaagagaaaacagtgaactcctgcgcattgagcag
aaagatttcaaggcactttgggagaaatatcgacagtatatgtctggacttctggctcct
ccatatggtgctatggaaactggctccaacaatgataggatgcctgacaaggagaatatg
tctaatagtagcctctgttcaatctcaaagaacagcaataaggtaccatcagaaaaaatc
ctccgagctggaaaagtattacggaatacgatcctctcccgtgctcctcacatgataaga
gaccggaagtaccacctgaagacctacagacaatgctgtgtaggaacagaactggtagac
tggataatgcagcagagttcctgtgttcatttacggactcaggctgtgggcatgtggcaa
gtattgctggaggaaggtgttctcaatcatgtggaccaggagcagtacttccaggacaaa
tatttattttatcgatttttggacgatgagcatgaagatgccccggtgatgccaactgag
gaggaaaagaaggaatgtgacgaagagctacaagacaccatcctcctgcttgctcagatt
ggaccggatgctcatatgaggatgattcttaggaagccacctggccagagaactgtggat
gatctcgaaattatttacgaagaacttttgcacattaaagctttatctcatctttcaaca
acagtaaaacaagaactagcaggctttctggtgtttgaatcacatcccaaagcagggaca
gttttatttaatcagggagaagaggggacgtcttggtatattattctgaagggttcagtc
aacgtagtaatttatggaaagggtgtggtgtgtactctacatgaaggtgatgattttggc
aagttagcattagtgaatgatgctcccagagcagcttccatcgttttacgggaagagaac
tgccacttcttgagagtagataaagaagattttaataggatactccgggatgttgaagca
aacactgtaagattgaaggaacatggccaagatgtcctggtgttagagaaggtcccagcg
ggaaacaggccttttaatcaaggaaatccacagcctcttcagcacaaatatattgtaatg
tcaggaactccagaaaaaattttagaacactttctagaaacgatgcgactagaatcaacg
ctaaatgaaggaatggatgccggtgtgaatgatttcgttacaatgcattgtgtattcatg
ccaaataatcaactttgtcccgctctgatggctcattaccatgcccaggcttctcaaggc
acagagcaagaaaaactggattatgcgctgaataataaaaggcgagttgtccgtttagtt
ctactgtgggctgctttttatggtgatgttttgccagaagaggaagcagcagtggcgttt
ctggaggaattttatgtatctgtatcggatgatgcaagggtcattacaatgctcaaagag
caactcccagagctagagaagactgtgaaacaaatatcagaagaagctaaaggacctcag
aaaaagcacaaagtccttttgcagcactttaacatgagtgatgaaagaacgcaaaaacgc
cagcccatcaggggaagtgatgaaattctattcaaggtatactgtgtggatcacacgtac
accaccatccgcattccagttttgtcatctgttaaagaagtcctctctgcaatagccgac
aaactgggctctggagatggcttgatattggtcaagatgagctcagcaggagtagagggc
agtagtgtatacagaaaagaagaaaactgtaaggaatataaaaacttgaattctttcctt
gctttgattatgggactaagcaacgttgcagtgagtcgcctcacaatgacctgggagaaa
cttccaagcaagttcaagaagatctatgcagagtttgaaagcttaatggacccttcaaga
aaccatagggcctacagactgacagtagctaaactggaaccccctattattccctttatg
cctctactcatcaaagacatgacatttacgtatgaaggtaacaagacctttattgacaat
ctggtgaactttgaaaaaatgcgcatgatttcaaatactattaagacagtgagattttgt
cggagcctgcctttcagtcctgatgcatctcaagcaaataagaaccatcaggatctccgg
ggttatgtccgtcaattaaatgtgattgataaccagaggactttatcgcagatgtcacac
cgtcttgagccgcggcgtacttaa
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