Thamnophis sirtalis (common garter snake): 106551445
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Entry
106551445 CDS
T06107
Symbol
TGFB1
Name
(RefSeq) transforming growth factor beta-1
KO
K13375
transforming growth factor beta-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04060
Cytokine-cytokine receptor interaction
tsr04068
FoxO signaling pathway
tsr04110
Cell cycle
tsr04148
Efferocytosis
tsr04218
Cellular senescence
tsr04350
TGF-beta signaling pathway
tsr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106551445 (TGFB1)
04350 TGF-beta signaling pathway
106551445 (TGFB1)
04068 FoxO signaling pathway
106551445 (TGFB1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106551445 (TGFB1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106551445 (TGFB1)
09143 Cell growth and death
04110 Cell cycle
106551445 (TGFB1)
04218 Cellular senescence
106551445 (TGFB1)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106551445 (TGFB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsr03110
]
106551445 (TGFB1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106551445 (TGFB1)
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106551445 (TGFB1)
Chaperones and folding catalysts [BR:
tsr03110
]
Intramolecular chaperones
Others
106551445 (TGFB1)
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Transforming growth factors (RSTK binding)
106551445 (TGFB1)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Growth factors/receptors
106551445 (TGFB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5546
CBM96
Motif
Other DBs
NCBI-GeneID:
106551445
NCBI-ProteinID:
XP_013925024
UniProt:
A0A6I9YM10
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MGSRSCDRPRGFSGPPGVLGWQQQATGLVFLLLVALQQLCSVWAFSTCKTLDMDLMKRKR
IEAIRGQILSKLKLPKPPEVEESDSQTLPEEVMALYNSTREIIREMVAEELQETVHEEYY
AKEVHRFMMIPVSDESYGDQYKKDNQNVYFGFNIKTIRNAISNPNLVYRAELRMQASGKG
QEQRLELYHQKNHSGNDSTWYYLQGLSLKVKSEKEWLSFDVTTVLRLWLASRDELGRFRL
STHCSCDGIRNDLAIQIEGTMNKRGDQGSLIGKSKQRPYLWIMATTPERADSSSHKRRKR
ANPDADFCSSQSPEAKNCCVRRFYIDFRKDLKWKWIYEPKGYYANFCMGPCPYLWSSDTQ
YSKVLGLYNLHNPSASAAPCCVPYELEPLGIVYYVGRQAKVEQLSNMIVKSCQCS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggctcacggagctgcgacaggccccggggcttctctgggcccccgggggtcttgggc
tggcagcagcaagccacgggcttggtcttccttctcctggtggccctccagcagctgtgc
tccgtctgggctttctccacttgcaaaaccttggacatggacctgatgaaacggaagagg
atcgaagccatccggggacagatcctcagcaaactcaagctcccgaaaccccccgaggtg
gaggagtcggactcgcagaccctacccgaagaggtcatggctctttacaacagcaccagg
gaaatcatccgagagatggtggctgaggaactccaggagaccgttcacgaagaatactac
gccaaggaagtgcaccgcttcatgatgatccccgttagcgatgaaagctacggcgatcag
tacaagaaggacaaccaaaacgtctactttggattcaacatcaaaaccatccggaatgcc
attagtaaccccaacttggtgtaccgggcagagctgaggatgcaagcctctggcaaaggg
caagaacagcgcctggagctttaccaccaaaaaaaccactcggggaatgattccacttgg
tactaccttcaagggctgtcgttaaaggtgaagagcgaaaaagaatggctgtccttcgat
gtcaccactgttctccggttgtggctcgcaagtagagacgagctggggagattccggctt
agcacgcactgttcctgtgatggcatccgaaatgatctagcgatacaaattgaaggcacc
atgaacaaaagaggagaccagggctcattaatcgggaaatcaaagcagcggccgtacctg
tggatcatggccaccacgccagaacgggccgattcctcgagtcacaagcggagaaaacga
gccaacccggatgccgatttctgcagcagccaatccccggaagcgaagaattgctgcgta
cggcgtttctacatcgatttccgaaaagatttaaaatggaagtggatctacgaacctaaa
ggctactatgccaatttctgcatggggccttgtccctacctctggagctcagatacccaa
tacagcaaggtcctcggtctctacaacctgcacaacccctcggcctcagccgcaccctgt
tgtgtcccctacgagctggagcccctgggcatcgtatactacgtcggccgacaagccaaa
gtggagcagctttccaacatgattgtcaaatcgtgccagtgtagctga
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