Thamnophis sirtalis (common garter snake): 106551857
Help
Entry
106551857 CDS
T06107
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106551857 (OTOF)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106551857 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ferlin_C
C2
dsrm_Ferlin
Motif
Other DBs
NCBI-GeneID:
106551857
NCBI-ProteinID:
XP_013925490
UniProt:
A0A6I9YP60
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MGRTFAKPVVKMSDEEYCPPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIGPAGKSDLPP
IDGPTDMDRGPILPVPLGIRPVLSKYRVEILFWGLRDLKRVNLSQVDRPRVDIECAGRGV
QSSLIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVNSLR
KFIYRPPDKKTPHWSTAAKLMNAYMTLANGGPYSHPTGEIVVNMEPEVPIKKMETMVKLE
ANSDAVVKVDVTEEEKEKKKKKKKGNAEEVEDEEPDESMLDWWSKYFASIETMKILRQQE
AAAAEAEEKEEMDTSEMRLEDSPMKGSKAQGKTKDKVKLSKEDKKKKQQQPQPDAPEKKS
KQKIDEMKVYPKELETEFDNFEDWLHTFNLLRGKIGDDDDNSADEDRIVGRFKGSLCVYK
VPLPDDITKEAGYDPTFGMFQGIPNNDPINVLVRVYIVRATDLHPADINGKADPYVAIKL
GKTDIKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAIYDWDLVGSDDLIGETKIDLE
NRYYSKHRATCGISWNYALHGYNMWRDPQKPTQILSKLCKEGKIDGPHYGPGGRVKVTNR
VFTGTTEVEDENGQKKQTDEHLALTVLHHWEEIPRVGCKLVPEHVETRPLLNPDKPGIEQ
GRLELWVDMFPMDMPAPGPAIDISPRKPKKYELRVIIWNTDEVVLEDDDYFTGEKSSDIF
VRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYIFPFDYLAAEEKIVISKKESMFSWDETE
YKIPARLTLQVWDADHFSADDFLGGIELDLNRFPRGAKTAKQCSMEMGTGEIEVPLISIF
KQKRVKGWWPFLARNENDEMEMTGKVEAELHLLTAEEAEKCPAGLARNEPDPLEKPNRPD
TSFIWFLNPLKSIRYFIWHTYRWLLLKILLLVLLLLMIGLFLYSMPGYLVKKLLGA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggacggacatttgccaaacctgtggtaaagatgtcagatgaggaatactgccctcca
cgtttcccgcctcagttggaatattaccagatctaccggggtaactcaactgcaggagac
ctgctggctgcctttgaactccttcagattggacccgctgggaaatcagatctgcctccc
atcgatggacccacagatatggatcggggtcccatcttgcctgtccctctggggattcgc
cctgttctgagcaaatatcgagtagagattttgttctggggattgagagatctgaagcga
gtgaatttgtcccaggtggatagacctcgagtggacattgaatgtgctggaagaggggtc
cagtcatctctcatccagaattataagaaaaatcccaatttcagcactttggtcaaatgg
tttgaagtggatctgcctgaaaatgaactcctgcatccacccctcaatattcgtgtggtg
gattgccgtgcctttgggcgttacacccttgtgggaagccatgctgtcaattccttacgg
aagttcatctatagacctccagataagaagactccacattggagcacagcagctaaactt
atgaacgcctatatgactcttgcaaatggggggccctactctcaccccacaggtgaaatt
gtggttaacatggagccagaggttcccatcaagaagatggagaccatggtgaagttggaa
gcgaattctgatgctgttgtgaaggtggacgtgacagaagaagagaaggagaaaaagaag
aagaagaagaaaggaaatgcagaagaagttgaggatgaggagcctgatgagagcatgctg
gactggtggtccaagtattttgcttccattgaaactatgaagatacttcggcagcaagag
gcagctgcagcagaagctgaggagaaagaagagatggacaccagtgaaatgagacttgag
gactctcctatgaaaggctcaaaagcccaaggaaagaccaaagacaaagtcaaattatcc
aaagaggacaagaagaaaaaacagcagcagccacagcctgatgcccctgaaaagaagagc
aagcagaagattgatgagatgaaggtgtatcccaaagaactggagacagagtttgataat
tttgaggactggctgcatacttttaacctccttcgtgggaagattggagatgatgatgac
aattctgcagatgaagatcgcattgtgggaagattcaaaggatccctgtgtgtttataaa
gtgcctcttcctgatgatatcaccaaggaggctggatatgaccctacttttggcatgttc
caaggaattccaaacaatgatcccatcaacgtgttggtccgggtctacattgtgagggct
actgatttgcatcctgctgacatcaatggcaaagctgacccttacgttgccatcaaactg
ggaaagacagatatcaaagacaaggagaattacatctctaaacagctgaacccagtcttt
ggaaaatcctttgatattgaggctacattccctatggaatccatgttgacggtggctatt
tatgattgggatttggtgggctcagatgatctgattggtgaaacaaagatagatctggag
aaccgatattacagcaagcacagagcaacctgtggcatttcttggaactatgctctacat
ggatataatatgtggagagacccccaaaagcctacccaaatcctatccaagctttgtaaa
gaaggaaaaattgatggtccccactatggccctggaggcagagtgaaggtgaccaatcga
gtcttcaccggcaccactgaagtagaggatgaaaatggtcagaaaaagcagacagatgag
catctggcactgactgtgttgcaccactgggaggaaatcccgcgtgtgggctgcaaatta
gtgcctgagcatgtggaaacaaggccattgctgaacccagacaagccaggcattgagcag
ggacggctggagttatgggtggacatgttcccgatggacatgccggcaccaggccctgcc
attgacatctcaccaaggaaaccaaagaaatatgaacttagagtaataatctggaacact
gatgaggtagtcctggaggatgatgattacttcactggcgagaaatccagtgacattttt
gtccgggggtggttgaagggccagcaagaagacaaacaggatactgatgtccactaccac
tcactgacaggagagggcaatttcaactggcgctacatctttcctttcgactaccttgca
gctgaagaaaagattgttatttctaagaaagagtctatgttctcctgggatgaaaccgaa
tacaagattccagcccgactcacattacaagtgtgggatgctgatcatttttctgctgat
gacttccttggaggcattgagcttgacttgaaccgcttcccgcgtggtgctaagacagcc
aagcagtgcagcatggagatgggaactggtgaaatagaggtgcccctgatctctatcttc
aagcagaagagggtgaagggctggtggccctttttggctcgaaatgagaatgatgaaatg
gagatgacgggtaaagtggaagctgagcttcatttactgacagctgaggaagctgagaaa
tgtccagctggattggctcgtaatgagccagacccattggaaaaacccaaccgcccagat
accagcttcatctggttcctgaaccctctcaagtccatccgctactttatctggcatacc
tatcgttggcttctgctgaaaatccttctcctcgttctcttgctccttatgattggcctc
ttcctttactctatgcctggctatctggtcaagaaacttctcggggcctga
DBGET
integrated database retrieval system
