KEGG   Thamnophis sirtalis (common garter snake): 106553508
Entry
106553508         CDS       T06107                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain-like
  KO
K06752  MHC class II antigen
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04145  Phagosome
tsr04514  Cell adhesion molecules
tsr04672  Intestinal immune network for IgA production
tsr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    106553508
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106553508
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    106553508
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106553508
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsr04147]
    106553508
Exosome [BR:tsr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106553508
  Exosomal proteins of epithelial cells
   106553508
  Exosomal proteins of breast milk
   106553508
SSDB
Motif
Pfam: C1-set Ig_3 C2-set_2
Other DBs
NCBI-GeneID: 106553508
NCBI-ProteinID: XP_013927496
UniProt: A0A6I9YTX8
LinkDB
Position
Unknown
AA seq 183 aa
MPPGNRSFRLPRRTAGRRLKRVPKKRPAGVAPLRRPPPPSESRFGRIPQVEIFTLRPLVL
GQPNVLVCSARNIFPPVARIRWAFQGQELTQGVSSTPVFPVQELDFQIFSYVEMTPREGD
IYSCTVKGLGGKFDTMAYWAPKDPVASKLLENVLCGLAVAVGGVFIIVGVVLLALSFRFR
SSD
NT seq 552 nt   +upstreamnt  +downstreamnt
atgccgccgggaaaccgttcgttccgtctcccccgccgcacagccggccgccgactaaag
cgagtgccgaaaaaacggcccgccggcgtggcccccttgcggcggcccccgcccccgtcc
gagtcccgctttgggcgaatcccccaagtggaaatcttcaccctccgtccccttgtgctg
ggccagccgaacgtcctggtctgctctgcgagaaacatcttccctcccgtggccagaatc
cgctgggccttccagggccaggagctgacccagggcgtctcctccaccccggtcttcccc
gtccaggagctggacttccagatcttctcctacgtggagatgacgccccgggagggggac
atctacagctgcaccgttaaaggcctggggggcaagttcgacaccatggcctactgggcc
cccaaagaccccgtggcctccaagctcctggagaacgtcctctgcggccttgcggtggcg
gtgggaggggtcttcatcatcgtgggggtcgtcctgctggccctctccttcaggttccgg
agctccgactga

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