Thamnophis sirtalis (common garter snake): 106554744
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Entry
106554744 CDS
T06107
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04060
Cytokine-cytokine receptor interaction
tsr04672
Intestinal immune network for IgA production
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106554744 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106554744 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106554744 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106554744 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106554744 (CXCL12)
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Chemokines
106554744 (CXCL12)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Chemokines
106554744 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
106554744
NCBI-ProteinID:
XP_013928956
UniProt:
A0A6I9YYF2
LinkDB
All DBs
Position
Unknown
AA seq
77 aa
AA seq
DB search
MAQRGKPISLTYRCPCRYFESHVSKSQIKHLKILTVPGCPLQVIARLKNSSKQICIDSKL
KWIQEYLEKYFQKRVKL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagagggaagcccatcagcctgacgtaccgctgcccttgcaggtattttgag
agccacgtctccaagtcccagatcaagcacctgaagatcctgaccgtccctggatgcccc
cttcaggtcatcgcaagactgaaaaacagcagcaagcagatctgcatcgactccaagtta
aagtggatccaggagtacctggagaaatactttcaaaagagagtcaagctgtaa
DBGET
integrated database retrieval system
