Thamnophis sirtalis (common garter snake): 106555130
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Entry
106555130 CDS
T06107
Name
(RefSeq) pro-epidermal growth factor-like
KO
K04357
epidermal growth factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04012
ErbB signaling pathway
tsr04020
Calcium signaling pathway
tsr04068
FoxO signaling pathway
tsr04510
Focal adhesion
tsr04540
Gap junction
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106555130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106555130
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Growth factors (RTK binding)
106555130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
EGF
EGF_CA
Vgb_lyase
EGF_3
cEGF
EGF_MSP1_1
SGL
FXa_inhibition
EGF_Tme5
hEGF
DUF2672
Motif
Other DBs
NCBI-GeneID:
106555130
NCBI-ProteinID:
XP_013929379
UniProt:
A0A6I9YZA6
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MESKIYFTHTDLKCIERSELDGTNREKVVCDASERPEGLALDWINRKLYWTDPGKCSIES
SNLNGMQRKIIIQEKVFHPQGIAVHPFTRELFWTNLGLNPHIGKSTLQGSERVIIANSGL
LWPSGITIDYAEDKLYWCDAKMSVIEMANLDGSNRQILAQNDVGHPYGITVFEHHIWVSD
WTRPSLLRIDKKNGLKKIRLGGSMMRPSSLLVVHPLAKPGRISTYKEDALGKEMFAGEIS
PQHLLINSKYGDSHGETQQTLTAEIVVSNQDNCTPLGCDLNSQCVADQNGAVCECQTGFI
MEDQLCHDVDECLLNQEQCNQSWSRCINTEGSYFCECLLGYSEDGLHCSESIIGPSVVTR
DDSTLSEKEGPMDCSPSYCFHQGVCIYISDLQTFACNCVKGYLGDRCQFSDLEWWEQQHE
MHLKKQNIATAAFLAVLFLVLLLGVAAFYFYRRQQSFSKREP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaagatttattttacccatacagacctgaagtgtatagagagatctgagctg
gatggcaccaatcgtgaaaaagttgtatgtgacgcaagtgagagaccagaaggactagca
ttagactggattaatcgcaaattgtactggactgaccccgggaaatgtagcattgaaagt
agtaatctaaatggaatgcagagaaaaataatcatccaggagaaggtgtttcatcctcaa
ggaattgctgttcatccatttaccagggaactgttttggacaaacctagggctcaatcca
catattggaaaatctactttacaaggctcagagcgtgtcattatagcaaattcaggcttg
ctttggcccagtggaataactattgactacgctgaggacaagctgtactggtgtgatgcc
aaaatgtctgttattgaaatggcaaacctggatggttctaatcggcaaatacttgcacag
aatgatgtaggccatccctatggcatcacagtttttgagcaccacatttgggtatctgac
tggactaggccttcattactcagaatagacaagaaaaatggcctcaagaagatacgcctt
ggaggaagcatgatgagaccctcttcactgcttgtagttcaccctttagccaaaccaggc
cgtatctctacatacaaggaagatgcattaggaaaggaaatgtttgccggagaaatatca
ccccagcatcttctgattaacagcaaatatggtgatagccatggggagacgcaacagaca
ctgactgctgaaattgtggtgtctaatcaggacaactgtacaccacttggttgtgatctc
aattcccaatgcgttgcagatcaaaatggtgctgtgtgtgagtgccagacagggttcatc
atggaagatcaactgtgccatgatgttgatgaatgccttcttaaccaagaacagtgcaat
cagagctggtccagatgtatcaatactgaaggaagttacttctgtgagtgccttttgggt
tattctgaagatggacttcattgttctgaatctatcatcggtccttctgttgtaaccagg
gatgactctacattatctgaaaaagaaggtcctatggactgctcaccatcctactgtttc
catcagggagtttgcatttatatttcagatctgcagacttttgcatgcaactgtgtgaaa
ggctacctgggagaccgctgtcagtttagtgacttggagtggtgggaacaacaacatgag
atgcatcttaagaagcaaaacatcgcaactgctgcgttcttggctgtgctgttcttggtc
ctgctccttggtgtggctgccttctatttctataggagacaacagagtttttccaagagg
gaaccctag
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