Thamnophis sirtalis (common garter snake): 106555890
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Entry
106555890 CDS
T06107
Name
(RefSeq) Ig heavy chain Mem5-like
KO
K06856
immunoglobulin heavy chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04020
Calcium signaling pathway
tsr04145
Phagosome
tsr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106555890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106555890
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Opsonins
106555890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
ig
Ig_3
V-set
C2-set_3
SPAN
C2-set_2
Motif
Other DBs
NCBI-GeneID:
106555890
NCBI-ProteinID:
XP_013930292
UniProt:
A0A6I9Z132
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MQSPLIFRLAVSRENAQNQLFLQMNNFKIDDSATYYCASYSNYAFDAWGQGTSVTVSNGA
SSAPVVFPLSPSDDQNEGDGQRLTDSNVSIGCLVKGYFPEPATVQWNSGAITSGIHNFPP
VHSSGHYTHASLLTIPITQWESESFHCNVEHAATHTTISKKIERCESHEPVAPAVHLLHS
PCSPKGKDGTIALVCFIENFYPKEIEVEWLVGSHSGLLTSYTEPPKRDAKKYTYSTHSFV
NVTEGDWLEGNTYYCQVTHAASQTRTKSRARKCEGNHLYI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcacccttaatatttcgccttgccgtctccagggaaaatgcccagaaccagctg
tttctgcaaatgaataacttcaaaatagatgactcggcaacctattactgtgcgagttat
agcaactatgcttttgatgcttggggacaaggaactagcgtgacagtctctaatggagct
tccagcgcccccgttgtcttcccattgagtcctagtgatgaccaaaacgagggggacggg
cagaggctcactgactccaacgttagcatcggttgcctcgtcaaaggatactttcctgaa
ccagccacagtacaatggaattcaggcgccatcaccagcggaatccacaacttccctcca
gttcattcatctggccactatactcacgccagcctgctcaccatccccatcacccagtgg
gaatctgagtcattccattgcaacgttgagcatgcagccacccacaccacaattagcaaa
aaaattgagcgatgtgaatcccatgaaccagtggctcctgcagtccatctgctccattct
ccttgcagcccaaaaggaaaggatggaaccatagcgctggtgtgcttcattgagaatttc
taccccaaagaaattgaggttgaatggctggtgggcagccacagtggattgctgacttct
tacaccgaacctccgaagcgtgatgcgaaaaagtacacttacagtacccacagcttcgtg
aacgtcactgaaggagattggttggaaggaaatacttactactgccaggtaacccacgca
gcatcacaaacaaggacaaaaagcagagccaggaaatgtgaaggtaatcatttatatata
taa
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