Thamnophis sirtalis (common garter snake): 106556718
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Entry
106556718 CDS
T06107
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03272
Virion - Hepatitis viruses
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106556718 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106556718 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106556718 (LDLR)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106556718 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Vgb_lyase
EGF_3
hEGF
Psg1
NBP1
Motif
Other DBs
NCBI-GeneID:
106556718
NCBI-ProteinID:
XP_013931166
UniProt:
A0A6I9Z5D1
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MSPAGLQTACVALMLLGILSRVSTNERGKCGRNEFQCRNGDCIPYKWICDDSPECRDGSD
ESLDACKSVTCSSTQFSCGGRINRCIDVSWRCDSEVDCENGSDEDNCPPKRCADHQFQCQ
NGNCVAFDFVCDEDDDCGDGSDELDCRAPTCNPEMFHCNSSECIPKLWACDSDADCKDGS
DESPAFCGIQQGAKKADPCSPLEFHCGSGECIHQRWQCDGSFDCKDRSDEADCGKHRLSP
PQSSLQKPHVGFEILRRKRRTNECLADKGGCSHICNDKKIGYECLCPEGFQLIDQRKCED
IDECLNPDACSQVCVNLQGSYKCECKEGYEIDPPTKACKAIGTIAYLFFTNRHEVRKMTL
DHSEYTNLIPHLKEAMALDMEISNNKIYWSDNFHKKIFSTPIDKAGNHSHHTTVISSGIK
APDGLAVDWVHHNIYWTDSGLGTISVASSEGLKRKTLIKEVGAKPRAIVVDPVHGFMYWT
DWGASAKIAKSGLNGVDSFPLVKEGIQWPNGITLDLITHRLYWVDSKYHSVSSIDVNGEN
RRTILVDNEMLAHPFGIAVFEDKVFWTDVLNEAIFSANRRTGSNIVKVAENLFSPEDLML
FHSVRQPKGVNWCEKNGVPNGGCQYLCLPAPQINLHSAKYTCVCPDSMHLGTDMRSCTQD
PATPVPPPVAATTVHSAKTSPAARLLSTRKTPTQKTDHLPADVLNNVVTNIPEQTTHEMV
TLSQQVQNGIAAETDGTERRGPSALAIVLPLALISLVSFGIFLIWKNWRLKNINSINFDN
PVYQKTTEDEIHICRSQEGYSYPSRQMVSLEDDAA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgctgggttgcaaaccgcttgcgttgccttgatgctgttgggcatcctcagc
cgagtctccacgaacgagcggggtaagtgcggaagaaatgaatttcagtgcagaaacgga
gattgcatcccttacaaatggatctgcgatgacagccctgaatgcagggatggttctgat
gaatccttggatgcttgcaaatctgtgacttgcagttcaacccagttcagctgtggcggc
cgcatcaaccgttgcattgatgtatcctggcggtgtgactcagaagtggattgtgaaaat
ggctcagacgaagacaactgccctccgaaacgctgtgcagatcatcagttccagtgccaa
aatgggaattgcgttgcttttgacttcgtctgtgatgaagatgatgactgtggagacggc
agtgatgaattagactgccgtgccccgacctgcaatcccgaaatgtttcattgcaacagc
tcagagtgcattcccaagctctgggcctgcgacagtgacgcagactgtaaagacggctcg
gatgaatcccccgcgttctgtggaatccagcagggagccaagaaagccgacccatgttct
ccactggagttccactgtgggagtggcgagtgcatccaccagcgctggcagtgcgacggg
agctttgactgcaaggacagatcggacgaggcagactgtggtaagcatcgactgagccct
cctcagagctctctgcaaaagccacacgtggggttcgagatcctccgcagaaagagaaga
actaatgaatgcttggctgataaaggaggctgttcccatatatgcaacgacaagaaaatt
ggatatgaatgtttgtgccctgaaggcttccagctgattgatcaaagaaaatgtgaagat
attgatgagtgtctcaaccctgatgcctgtagccaagtctgtgtgaacctgcaaggaagc
tataaatgcgaatgtaaagaaggatatgagattgatccgcccaccaaggcttgcaaagca
attggcaccattgcgtacctcttttttaccaatcgccatgaggtcaggaaaatgacgtta
gaccacagcgagtacacaaatctgatcccccatctgaaagaagcaatggccttagatatg
gaaatcagcaacaataaaatctactggtctgacaactttcacaagaaaatattcagcacc
ccgattgataaggctggcaaccattcgcaccataccacggtgattagcagcggcattaag
gctccagacggcctggctgttgactgggtgcatcacaatatttactggactgactctggc
ttaggcaccatctctgtggccagcagtgaaggcttgaagaggaagacgctgatcaaggag
gtcggggccaaaccacgtgccattgtggtggatccagtccatgggttcatgtactggact
gactggggggcgtctgctaaaattgccaagagtggactgaacggagtggacagtttcccc
ttggtgaaagagggcattcagtggcccaatggaataacattagatctgattacgcatcgc
ctctactgggtagactccaaataccactcggtctccagcattgatgtgaacggggaaaac
agaaggacgatcctggtggataacgagatgctggcgcacccttttggcattgcagtcttt
gaggataaagtattctggacagatgtcttgaacgaagccatcttcagtgccaaccgccga
actggttcaaatattgtgaaagtggcagagaatctcttttcaccagaggatttgatgctc
ttccattctgtacggcaaccaaaaggtgtaaactggtgtgagaagaatggcgtccccaat
ggaggctgccagtacctctgcctcccagccccccaaatcaatctccattctgccaagtac
acctgtgtctgccctgacagcatgcacctgggcaccgacatgagaagctgcacccaagat
cctgctacacctgttcccccacctgtggctgctacgacagtgcactctgctaagacctca
cctgcagcacggctgctatctacaaggaagactccgacccagaaaacggatcacctgcct
gcagatgtgctgaataatgttgttaccaacatcccagaacaaaccactcatgagatggtc
actctgtcccagcaagtccaaaacggcattgctgcagaaacagatgggacagaacggaga
ggcccatcagcactcgctattgttctacctctggcactgattagtctggtttcttttggg
attttcctcatttggaagaactggcgtctcaagaacatcaacagtatcaattttgataac
cccgtttatcagaagacaacggaggatgagattcatatctgtcggagccaggaaggatat
tcatacccatcaagacagatggtcagcctggaagatgacgcagcatga
DBGET
integrated database retrieval system
