KEGG   Telopea speciosissima (New South Wales waratah): 122641411
Entry
122641411         CDS       T07910                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03420  Nucleotide excision repair
tss04120  Ubiquitin mediated proteolysis
tss04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122641411
   04120 Ubiquitin mediated proteolysis
    122641411
  09124 Replication and repair
   03420 Nucleotide excision repair
    122641411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122641411
   03400 DNA repair and recombination proteins [BR:tss03400]
    122641411
Enzymes [BR:tss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122641411
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122641411
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122641411
   Cul2 complex
     122641411
   Cul3 complex
     122641411
   Cul4 complex
     122641411
   Cul7 complex
     122641411
   Cul8 complex
     122641411
   Cul9 complex
     122641411
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122641411
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122641411
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2
Other DBs
NCBI-GeneID: 122641411
NCBI-ProteinID: XP_043690576
LinkDB
Position
1:complement(29937427..29937975)
AA seq 118 aa
MASLDTDINMVPVSEGSSGAGPSSSTKKPKRFEMKKWNAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASVTIEECTVAWGVCNHAFHFHYISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcgtctctggacaccgatattaacatggttcccgtcagcgagggttcgagcggcgcc
ggtccttcatcttcaacgaagaaacctaaacgattcgagatgaagaagtggaatgccgta
gccctttgggcttgggatattgtggtggataattgtgcaatttgcaggaatcatatcatg
gatctttgtatagagtgtcaagctaatcaagctagtgtgaccattgaggagtgcacggta
gcttggggtgtgtgcaaccatgcgtttcacttccactatatcagccgatggctcaagacc
cgacaagtgtgtcccttagataacagtgagtgggagttccaaaagtatggccactag

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