Telopea speciosissima (New South Wales waratah): 122642722
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Entry
122642722 CDS
T07910
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122642722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122642722
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122642722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
NACHT
AAA_28
SMC_N
AAA
AAA_15
AAA_22
AAA_18
AAA_23
AAA_5
AAA_25
AAA_16
Zeta_toxin
AAA_30
AAA_33
SRP54
PduV-EutP
Arf
DUF3584
AAA_14
FtsK_SpoIIIE
AAA_7
AAA_13
Motif
Other DBs
NCBI-GeneID:
122642722
NCBI-ProteinID:
XP_043692226
LinkDB
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Position
10:complement(51525953..51536578)
Genome browser
AA seq
295 aa
AA seq
DB search
MGKEAAQLSGEESSSTIEVSGLHFAYESQAPLFASFNLKISPGSRCLLVGANGSGKTTLL
RILAGKHMVGGRDVVRVLNCSAFHDTQLVCNGDLAYLGGSWSKSVGSAGDIPLQGDFSAE
HMIFGVDAIDPARREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLYPFEVLLLDEVTV
DLDVVARMDLLEFFKEECEQRGATIVYATHIFDGLETWATDVAYIQDGELKRSEKLSEVP
ELKDAANLLSVVESWLRSEIKGEKKKLINPPIQSRKASPLDNSPFRSTRHMAYYR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaggctgcgcagttgagtggagaggagagttcgagcaccatcgaagtctct
ggtttgcatttcgcctatgaaagccaagctccgttattcgctagtttcaatctcaagatt
tctcctggatctcgatgtcttctcgttggtgcaaatggatctgggaagaccactttactg
aggattctggccggtaagcatatggtcggaggaagagatgttgtacgggtgctaaactgt
tctgcgtttcatgatacccaactggtctgcaatggtgacttggcatatctgggaggctca
tggagtaaaagtgttggttctgctggggacataccactccagggagatttttctgctgaa
cacatgatatttggagtcgatgcgattgatcctgctaggagagaaaagttgatcgagctg
cttgatatcgatctgcagtggcgaatgcacaaagtatccgatgggcagcgacgccgagtc
caaatctgcatgggtcttctttatccttttgaggtgcttttgctagatgaggttactgtt
gacctagatgttgttgcaaggatggatttactcgaattcttcaaggaagaatgtgaacag
agaggagcaacaattgtgtatgcaacccacattttcgacgggttggagacatgggctaca
gatgtagcatacattcaagatggagagttaaagaggtcagagaaattgtctgaggtccca
gagttgaaggacgctgccaacttgctttcagtggtcgaatcttggcttcgttctgaaatc
aaaggtgagaagaagaaactcatcaatcctcctatccaatccagaaaggcatctcccttg
gacaactctccttttagatcaacaaggcacatggcctactaccgctga
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