Telopea speciosissima (New South Wales waratah): 122646312
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Entry
122646312 CDS
T07910
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122646312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122646312
03041 Spliceosome [BR:
tss03041
]
122646312
03032 DNA replication proteins [BR:
tss03032
]
122646312
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122646312
Spliceosome [BR:
tss03041
]
Complex A
U1 snRNP components
Sm proteins
122646312
U2 snRNP components
122646312
Complex B
U1 snRNP components
122646312
U4/U6.U5 tri-snRNP components
122646312
Complex C
U2 snRNP components
122646312
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122646312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122646312
NCBI-ProteinID:
XP_043695777
LinkDB
All DBs
Position
11:complement(31840544..31861898)
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AA seq
280 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPVKGKKDE
EREGRRTLGLVLLRGEEVVSMTVEGPPPPEESRAKAVGAAAMAGPGLGRAAGRGIPTAPL
VQAQPGLAGPVRGVGGPAPNMMQPQISRPPLPQLSAPPVSYPQGPMLRPPGQVPGFPGQP
PQQMGRGPPPPGPSQFPPRPGSAPPFPMPPPQFGQRPMMPPPQMMRGPPPPPRPGMPAPP
PRPGMPPPPGGAIPVYGPPRPGMPPPPNLQQQQQNQQQQQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagttcaaagatgctccaatacatcaactacaggatgcgcgtgacg
atccaagatggccgtcagctgatcggtaagttcatggcttttgatcgacacatgaatctc
gtcctcggcgattgtgaggagttccgaaagctcccacctgttaaaggcaagaaggacgaa
gaacgtgagggaaggcgaaccctagggcttgttcttctccgaggagaagaggttgtgtcc
atgaccgtagaaggtcctcctcctcccgaagaatcgagagctaaggcagttggagctgct
gccatggccggccctggccttggccgtgcggcgggccgtggaattccaacggcgccactt
gtgcaggctcaacctgggcttgctggtcctgttcgtggtgttggtgggccggctccgaac
atgatgcagcctcagatttcgcggcctccactgccgcaactgtctgcacccccggtttcg
tatccgcagggtccgatgcttcgtccgccagggcaggttcctgggttccctggtcagcct
ccacagcagatgggcagaggaccgccaccgcctggaccgtctcagttccctccaaggccc
ggttcagcaccaccattcccaatgccaccacctcagtttgggcagcggccgatgatgcct
ccacctcaaatgatgaggggaccgcctccaccacctcggccgggaatgccagctccaccg
cctcgtccaggaatgccgcctccacctggtggtgcaattccagtttacggcccaccccgt
cctggtatgcctccaccgcccaacctccagcaacaacagcagaatcagcagcagcagcaa
tga
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