KEGG   Telopea speciosissima (New South Wales waratah): 122653778
Entry
122653778         CDS       T07910                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03420  Nucleotide excision repair
tss04120  Ubiquitin mediated proteolysis
tss04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122653778
   04120 Ubiquitin mediated proteolysis
    122653778
  09124 Replication and repair
   03420 Nucleotide excision repair
    122653778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122653778
   03400 DNA repair and recombination proteins [BR:tss03400]
    122653778
Enzymes [BR:tss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122653778
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122653778
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122653778
   Cul2 complex
     122653778
   Cul3 complex
     122653778
   Cul4 complex
     122653778
   Cul7 complex
     122653778
   Cul8 complex
     122653778
   Cul9 complex
     122653778
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122653778
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122653778
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 122653778
NCBI-ProteinID: XP_043703650
LinkDB
Position
3:complement(27831241..27842289)
AA seq 118 aa
MASLDTDINMVPVGEGSSGAGPSSSTKKPKRFEIKKWNAVVLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcgtctctggacaccgatattaacatggttcccgtcggcgagggttcgagcggcgcc
ggtccttcatcttcaacgaagaaacctaagcgattcgagattaaaaagtggaatgccgta
gtcctttgggcttgggatattgtggtggataattgtgcaatttgcaggaatcatatcatg
gatctttgtatagagtgtcaagctaatcaagctagcgcgaccagtgaggagtgcacagta
gcttggggtgtgtgcaaccatgcgtttcacttccactgtatcagccgatggctcaagacc
cgacaagtgtgtcccttagataacagtgagtgggagttccaaaagtatggccactag

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