KEGG   Telopea speciosissima (New South Wales waratah): 122653937
Entry
122653937         CDS       T07910                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03008  Ribosome biogenesis in eukaryotes
tss03013  Nucleocytoplasmic transport
tss03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122653937
   03008 Ribosome biogenesis in eukaryotes
    122653937
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122653937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122653937
   03009 Ribosome biogenesis [BR:tss03009]
    122653937
   03016 Transfer RNA biogenesis [BR:tss03016]
    122653937
   03036 Chromosome and associated proteins [BR:tss03036]
    122653937
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tss04147]
    122653937
   04031 GTP-binding proteins [BR:tss04031]
    122653937
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122653937
Ribosome biogenesis [BR:tss03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    122653937
  Pre-60S particles
    122653937
Transfer RNA biogenesis [BR:tss03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122653937
Chromosome and associated proteins [BR:tss03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122653937
   Spindle formation proteins
    122653937
Exosome [BR:tss04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122653937
GTP-binding proteins [BR:tss04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    122653937
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_7 AAA_22
Other DBs
NCBI-GeneID: 122653937
NCBI-ProteinID: XP_043703837
LinkDB
Position
3:18178899..18182041
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV
ESPALAPPEVQIDMATQEQHEAELAVAAAQPLPDDDDDAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgcttccgaaccaacaaactgtcgattatccaagcttcaagcttgtcatcgttggt
gatggtggtacaggaaagacgacttttgttaaacggcatcttactggagagtttgagaag
aaatatgagccgactattggtgtcgaagttcatccattggacttcttcacgaactgtggg
aagatccggttttattgttgggacactgctggccaagagaaatttggtggactaagagat
ggatattatatacatggacaatgtgctatcattatgtttgatgtcacagctcgtttaaca
tacaaaaatgttcccacatggcaccgggatctctgcagggtgtgtgagaatatccctatt
gttttatgtggaaataaggttgatgtcaagaacaggcaagtgaaagcaaagcaggtcaca
ttccacaggaagaagaatctccagtactatgagatctctgcgaaaagcaactataacttt
gagaaacctttcctctatctggctagaaaacttgctggggatgctaacctccactttgtc
gagtctccagctcttgctccgcctgaagttcaaatcgacatggcaacacaagaacagcat
gaagctgagttggcggtagctgcagcacagcctctccctgatgatgatgatgacgcattc
gagtag

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