KEGG   Telopea speciosissima (New South Wales waratah): 122658402
Entry
122658402         CDS       T07910                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03420  Nucleotide excision repair
tss04120  Ubiquitin mediated proteolysis
tss04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122658402
   04120 Ubiquitin mediated proteolysis
    122658402
  09124 Replication and repair
   03420 Nucleotide excision repair
    122658402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122658402
   03400 DNA repair and recombination proteins [BR:tss03400]
    122658402
Enzymes [BR:tss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122658402
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122658402
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122658402
   Cul2 complex
     122658402
   Cul3 complex
     122658402
   Cul4 complex
     122658402
   Cul7 complex
     122658402
   Cul8 complex
     122658402
   Cul9 complex
     122658402
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122658402
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122658402
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_UBOX PHD_NSD zf-RING_16
Other DBs
NCBI-GeneID: 122658402
NCBI-ProteinID: XP_043709280
LinkDB
Position
4:complement(58240624..58241179)
AA seq 118 aa
MASLDTDINMVPVGEGSSGAGPSSSTKKPRRFEIKKWNAVALWAWDIVVDNCAICRNHIM
DLCIESQANQARATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcgtctctggacaccgatattaacatggttcccgtcggcgagggttcgagcggcgcc
ggcccttcatcttcaacgaagaaacctagacgattcgagattaagaagtggaatgccgta
gccctttgggcttgggatattgtggtggataattgtgcaatttgcaggaatcatattatg
gatctttgtatagagagtcaagctaatcaagctagagcgactagtgaggagtgcacggta
gcttggggtgtgtgcaaccatgcgtttcacttccactgtatcagccgatggctcaagacc
cgacaagtgtgtcccttagataacagtgagtgggagttccaaaagtatggccactag

DBGET integrated database retrieval system