Telopea speciosissima (New South Wales waratah): 122659542
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Entry
122659542 CDS
T07910
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122659542
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
122659542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Agenet
Motif
Other DBs
NCBI-GeneID:
122659542
NCBI-ProteinID:
XP_043710580
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All DBs
Position
4:64657436..64675389
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AA seq
628 aa
AA seq
DB search
MAKAYRTSDFVEVCSNDEGFLGSYFAAKENTMSFSSEGSGGKGKNKDDSKLAWKVWEEKN
ETWVDENEREDTDMEHLNEEVEANDIAEPLQDWPMVLYTYQKKWISWALKQEESEIRGGI
LADEKGMGNTFQAIAFVLFKQQNRTIPQSTCSHTDPSASTSTVLPEIKCTLIVCSVLDIM
RWVSEIGRFTPTAHPSILVFYGANGKKSSKELSEYDFVLTTYFTIETEFNVMTHDRSRNS
VLHSVKWERLILDEAHYLKDTSSSTAKAVLALESSYKWALTDTQLLICFRELFPLVRFLQ
ISPYSYRFCRDCDCKSLDYSSTSECQNCVHKSTRHFFWWNRSILKPIQTSGDVEGGRRRT
RAIILLKHRILKSIMLRRTEKGQAADLIRPPKIFCLRRVSANSKEEDYYNTEYNSLLLKA
HRSPVVNTSSVRIRVMGFKRLSDSSIQMCIEDFQNSTKIEALKREIVKMLENDRTAKGIV
FSQYESFLNLISISLQQSGISCIHFVGYQKRNEIDSAAMRFIEDPECKIWLMSLKAACVT
PNLTAASYVFLMDPWWNPAVERLVQDLIDQLRQYKPIRIIRLIIKDTIEERILQLLEKKE
PMFKETIGGSSQACGILTDPDLRFLLNI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcatatcgaaccagtgattttgttgaagtttgtagcaatgatgaaggtttc
ttgggttcctacttcgccgcgaaggagaacaccatgagttttagttccgagggctcaggt
ggaaaaggaaaaaataaagatgattcaaagttagcatggaaggtttgggaggaaaagaat
gagacatgggttgatgaaaacgaaagagaagatactgatatggaacatctgaacgaagaa
gtagaagcgaatgacattgccgagccactccaagactggccgatggttttgtatacttac
cagaagaaatggatttcgtgggccttgaaacaagaggaatcagaaatcagaggaggaatc
ctggcagatgagaagggaatgggaaacacattccaggccattgcatttgttctgttcaaa
caacagaatcgcacgataccgcagtcaacttgtagccacacggatccatctgcttctaca
agtacagtgttgcctgaaattaaatgcacactaattgtttgttctgttcttgatatcatg
cggtgggtgagtgagattggtcggttcacacccacagcgcaccccagcattttggtgttt
tacggggccaatggaaagaagagttcaaaggagctctctgagtacgattttgtcctaacc
acatatttcactattgagaccgaattcaatgtgatgacccatgatcgctcaaggaattct
gtgctgcactctgtcaagtgggaacgccttattctagatgaagctcattatctgaaagat
acaagcagtagtactgctaaggctgttcttgccttggaatcttcatataaatgggctttg
actgacacacaacttctgatttgttttcgagaactttttccacttgtccggtttctacag
ataagtccttactcatatcgcttctgtagagattgtgattgtaaatcacttgattacagt
tctacatcagagtgtcagaattgtgttcataaatctacgaggcatttcttttggtggaat
agatctatccttaaaccaatacaaacatcaggagatgttgagggaggcagaagacgaacc
agagccataatactactaaaacatagaatcttgaaaagcataatgctaaggcgcacagag
aaaggtcaggctgccgatctaatccgtcctccgaaaattttttgcttgaggcgggtttct
gctaacagtaaagaagaagattactacaacacagagtataattcacttctgttgaaggct
cataggtcacctgttgtcaacacttcttctgtgagaataagggtgatggggtttaaacgt
ttatctgattcaagtattcagatgtgtattgaagattttcagaatagcacaaaaattgaa
gctttgaaacgcgaaatcgttaaaatgcttgaaaatgatcgcactgcaaaagggattgtt
ttcagccagtatgaatcatttctgaatttgataagcatctctctccaacagtctggaatt
tcttgcattcattttgtgggctaccagaaaaggaatgaaatagattccgcagcgatgaga
tttattgaggatccagaatgcaagatttggctaatgagcttaaaagcagcgtgtgttacc
cccaatttgacagcagcatcatatgttttcttaatggatccctggtggaatccagctgtt
gagcggctggtccaagatctaatcgaccaacttagacagtataaaccaatcagaatcata
cgtttgatcataaaagatacaattgaagagaggattctgcagctgcttgagaagaaggaa
ccgatgtttaaagagactataggtggttcttctcaggcttgtggaatactaactgatcct
gacttgagatttttgctcaatatataa
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