Telopea speciosissima (New South Wales waratah): 122664050
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Entry
122664050 CDS
T07910
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122664050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tss01007
]
122664050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122664050
Enzymes [BR:
tss01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122664050
Amino acid related enzymes [BR:
tss01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122664050
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122664050
Prokaryotic type
Other AARSs
122664050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122664050
NCBI-ProteinID:
XP_043715666
LinkDB
All DBs
Position
6:56504802..56599885
Genome browser
AA seq
1073 aa
AA seq
DB search
MAMQTSPYRILSQRTHINGGKRTGFRKSSLNKVFPILNAMHYSTFLGEDCATISKRRYSG
LIIAARKASEAASGTKQENGKYKDTVDLPKTKFDLRANAVVREPQIQKLWDDNQVFKRVV
DRNNGGSFIIHDGPPYANGILHCGHALNKILKDIINRYKLLQNYKVHYVPGWDCHGLPIE
LKVLQSMDQDARRELTPLKLRAKAAKFAKDTVKTQMKSFKRFGIWGDWNNPYLTLNPEYE
AAQIEVFGQMVIQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISRSIYAIFKLASAPP
TSYNLLEEFFPHLCLAIWTTTPWTVPANAAVAVNAKLHYAVVEVLPMSDASESLGSGKRK
LGNVLNGQWTRNLFLIVASDLVPALESKWGVKLAVKKTLSGSDLENCRYLHPIDKQECPV
VIGGDYITTESGTGLVHTAPGHGQEDYVTGLKYGLPILSPVDDEGRFTEEARQFSGLDVL
SDGTDAVVKYLDEQLLIIMEEPYKHKYPYDWRTKKPTIFRTTEQWFASVEGFRQAAMDAI
GQVKWIPAQAQNRISAMTSSRSDWCISRQRNWGVPIPVFYHVDSKEYLMNEETINHIKSV
ISQKGSDAWWYMSVEDLLPEKYRDKASDYQKGIDTMDVWFDSGSSWAAVLEKRDGLNFPA
DLYLEGTDQHRGWFQSSLLTSIGTRGKAPYSCVVTHGFVLDEKGLKMSKSLGNVVDPSIV
IEGGKNPKESPAYGADVLRLWVSSVDYSGDVLIGPQILRQMSDIYRKLRGTLRYLLANLH
DWKPDNAVPYSDLPKIDQHALFQLENVVTNIRECYEIYQFYKIFQIIQRFAIVDLSNFYF
DIAKDRLYVGGTASFSRRSCQTVLAAHLLSIVRIIAPILPHLAEDVWQHLPFEYAIEDGS
VAKFVFEAGWPDKDERWRAMPVEDVDLWEKVLELRTEVNKVLETARGGKLIGSSLDAKVY
LYTTDADLASRLHGICVASNDADALHRIFITSQVEILASLENELIKSITYKGEYLIQGRS
RVWIGVSRAEGSKCERCWNYSTEVGSFTEHPTLCCRCYNVVNIQLSPEMAAVS
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcaaacctctccgtacaggattttgtcgcagagaactcatataaatggtgga
aaaaggacaggttttagaaagagctctttgaataaagtcttccctatcttgaatgccatg
cattattctacttttttgggtgaagactgtgctaccatttcaaagagaagatatagtgga
ctaatcattgcagcaaggaaggcatcagaagctgcttcaggtacgaagcaagaaaatgga
aagtataaggacactgttgatctgcccaagacaaaatttgatctaagggcaaatgctgtt
gttagggagcctcaaattcagaagctatgggatgataatcaggtcttcaagagagttgtc
gataggaataatgggggaagcttcatcattcatgatggtccaccatatgccaatggaatt
ctacattgtggccatgctttaaataagattctgaaagatattatcaatcggtataagctt
cttcaaaattataaggtccattatgtccctggctgggattgccatggccttccaattgag
ttgaaagttctacagtcaatggatcaagatgccagaagggagctcacaccattgaagttg
agagctaaggctgccaaatttgcaaaagacactgttaaaactcagatgaaatcattcaag
cgctttgggatttggggtgactggaataatccttatttaactcttaatccagaatatgaa
gctgctcagattgaagtgttcggtcaaatggttatacaaggatatatttatagaggccgt
aagccagtccattggagtccgtcatcacgcactgctctagcagaggctgagttagagtat
cctgaggggcacatttcgagaagtatatacgctattttcaaattggctagtgcacctccc
acttcatataacttattggaggaattttttccacatttgtgcttggctatatggacaaca
actccttggactgtcccagcaaatgctgctgtggcggtgaatgctaagcttcattatgct
gtggtcgaagtattaccaatgagcgatgcttctgaatcactgggaagtggaaaacggaag
cttggtaatgttctgaatggacaatggaccaggaatctattcctcattgtggcgtcagat
cttgtgccggcattagaatcaaaatggggtgtgaagcttgcagtcaagaaaactctatct
ggttctgatcttgaaaattgcaggtatctgcatccaatagataaacaggaatgtcccgtt
gtaattgggggagactatataacaactgagtctggaactggactggtccacacagcccct
ggtcatggtcaggaggattacgtaactggcctgaagtatggactgcctatactttctcca
gtagatgatgaagggaggtttactgaagaagctcgtcaatttagtggattagatgtcctc
agtgatggtactgatgccgtggtaaaatacttggatgaacagttgttgattattatggaa
gaaccttacaagcacaagtacccatatgactggagaacaaaaaagccgacaatatttaga
acaacagagcaatggtttgcttcagttgaagggtttcgacaggctgctatggatgcaatc
ggacaagtcaaatggataccggcacaggctcaaaacagaatttctgcaatgacttctagc
cgctctgattggtgtatttcacgtcaaaggaattggggagttcccattccagttttttat
catgtagattcaaaggaatatctgatgaatgaagagactatcaatcatatcaagtctgta
atatcccaaaagggaagtgatgcatggtggtacatgtcagtggaagatctactcccagaa
aaataccgtgataaggcatcagattatcagaaaggaattgatacaatggatgtttggttt
gattcaggctcttcttgggctgctgtattggagaaaagagatggccttaatttccctgca
gatttgtaccttgaaggtacagatcaacatcgaggatggttccaaagttccttgttgaca
agtattggtacaagaggaaaagctccatattcttgtgtcgtaacacatggatttgtgcta
gatgagaaaggcttaaagatgagcaagtctttgggtaatgtcgtggatccaagtattgtc
attgaaggagggaaaaaccccaaggaatcacctgcttatggagcagatgtactgcggctt
tgggtttcaagtgtagattattctggtgatgtactgattgggcctcaaatcctccgtcaa
atgtcagacatatataggaagcttcgtggcacattgcgatatttattggcaaatctgcat
gattggaaaccggataatgctgttccgtatagtgatcttcctaaaatcgaccagcatgct
ctcttccagcttgaaaatgttgtaacaaacatcagagagtgctatgaaatttatcagttc
tacaagattttccagatcatacaacggtttgccattgtagatctatcaaatttctacttt
gacattgctaaagaccgactttatgttgggggcactgcaagcttttccaggagaagttgt
caaacagttcttgcagctcatcttctctctattgtgagaataattgctccaatattgcct
catttagctgaggatgtgtggcaacaccttccctttgagtatgccattgaagatggttcg
gttgctaaatttgttttcgaggcaggatggccagataaagatgaaagatggcgggccatg
ccagttgaagacgttgatctctgggagaaagttcttgagctaaggaccgaggtgaataag
gttctagaaactgctcgtggtgggaagctaataggttccagtctagatgcaaaggtttat
ctatacactacagatgcagacctagcatccagattacatggaatatgtgtggccagcaat
gatgcagatgccttgcatcggatattcataacatctcaggtcgaaatccttgcttcgttg
gagaatgaactgatcaaaagcattacatacaagggagaatatctaattcaagggaggagc
agagtttggattggtgtgtctcgtgctgagggttcaaaatgtgaaagatgctggaactac
tcaacggaagttggttccttcactgagcatcccacgctctgttgccgttgttataatgtc
gttaacatccaattgtctcctgaaatggcagcagttagctaa
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