KEGG   Telopea speciosissima (New South Wales waratah): 122670357
Entry
122670357         CDS       T07910                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03008  Ribosome biogenesis in eukaryotes
tss03013  Nucleocytoplasmic transport
tss03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122670357
   03008 Ribosome biogenesis in eukaryotes
    122670357
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122670357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122670357
   03009 Ribosome biogenesis [BR:tss03009]
    122670357
   03016 Transfer RNA biogenesis [BR:tss03016]
    122670357
   03036 Chromosome and associated proteins [BR:tss03036]
    122670357
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tss04147]
    122670357
   04031 GTP-binding proteins [BR:tss04031]
    122670357
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122670357
Ribosome biogenesis [BR:tss03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    122670357
  Pre-60S particles
    122670357
Transfer RNA biogenesis [BR:tss03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122670357
Chromosome and associated proteins [BR:tss03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122670357
   Spindle formation proteins
    122670357
Exosome [BR:tss04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122670357
GTP-binding proteins [BR:tss04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    122670357
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU G-alpha Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 122670357
NCBI-ProteinID: XP_043723134
LinkDB
Position
8:30617861..30632449
AA seq 220 aa
MALPNQQTVDYPTFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFHTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPYLYLARKLAGDPNLHFV
ESPALAPPEVHIDMATQEQHEAELAAAAAQPLPDDDDAFE
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgctaccgaaccagcaaactgtggattaccctaccttcaaactcgtgatcgtcggt
gatggcggcacagggaaaactacttttgttaaacgtcatctcactggagaatttgaaaag
aagtatgagccgactattggcgttgaagttcatcccttggacttccataccaactgtggg
aaaattaggttctattgttgggatactgcgggtcaggagaaatttggtggactcagagac
ggctattacatccatgggcagtgcgccattattatgtttgatgtcactgcacgtttgacg
tacaagaatgttcctacatggcacagggatctctgcagggtgtgtgagaatattcctatt
gttctttgtggaaacaaggttgatgtcaagaacaggcaggtgaaggcgaagcaggtcaca
ttccaccgtaagaagaatctccagtactatgaaatctctgcaaagagcaactacaacttc
gagaaaccgtacctgtatcttgcaagaaaacttgctggcgatcctaacctccacttcgtt
gagtcacctgcacttgctcctcctgaagttcatattgatatggccacacaagaacagcat
gaagctgaactggcggcagcggcagcacagcctcttcctgatgatgatgatgcattcgag
taa

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