Trachemys scripta elegans (red-eared slider): 117867355
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Entry
117867355 CDS
T07347
Symbol
TRIM37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117867355 (TRIM37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117867355 (TRIM37)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117867355 (TRIM37)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117867355 (TRIM37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
HlyD_2
MRFAP1
LAMB1
BORCS6
PIN_8
Motif
Other DBs
NCBI-GeneID:
117867355
NCBI-ProteinID:
XP_034608161
LinkDB
All DBs
Position
18:complement(4782065..4841803)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAGAAAGTCSPGRWGPSPLRAGAGRAEAMDEQSVESIAEVFRCFICMEKLRDARLCPHCS
KLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLTKHEENEK
DKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRR
RLMELISLVQEVERNVEAVRSAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLT
QETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSEL
VPAYDSTTFVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELS
AGLPETSKYEYRVEMVHQSTNDPAKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNR
QNDTVILRFQVRSPTFFQKCRDQHWYVTQLEAAQTSYIQQINNLKERLAIELSRTQKSRG
MSPPDTHLSPQNDDGPETRPKKSGPNPEVLLESVTTPALARDAKDEEEEKIQHEDFNYEL
SDGDLDVDLAGEDEVNHLDGSSSSASSTATSNTEENDIDEETMSGENDVEYNSNMELEEG
DLQDDAAAAGGASGSSHGYPNASGRSSRRGGSTLGSAASSSLLDIDPLILIHLLDLKDRN
GMDNLWGLQPRPPASLLQNRASSYSLKDRDQRRHQAMWRVPPDLKMLKRLKTQMAEVRSK
MSDVKNQLSEVRSSNAGSCEGQPSFLPGDQGPLAACGTESCSKLQEIGMELLTKSSITSC
YIKSFTSKKSNSPKATRSGAAGSLSLRRAMDCGDNNLRSKGDCQTSSEGCIGSSKSGSRH
GSSRSLTNGNAPDALPKPEERECEGSDSDVGVSALNGLTTMEKTRKAVALGSDSKGCHTE
GTQPTDQENNSETGELQAILSEGTSAEPEEGSPLLFAAGLCQKHVLHLLPGMSSDSDIEC
DTENEEQEDATSTSDAFNHAFDVQPSSEGCREHLLWTAGPLVTAKLWYQSGELEKRHGNL
WLQIHHPSCG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctgcggccgggacctgctccccggggcgctggggaccctccccgctccgg
gcgggcgccgggagagccgaggccatggacgagcagagcgtggagagcattgctgaggtg
ttccgatgttttatttgtatggaaaagttgcgtgatgcacgtctgtgtccacattgctcc
aagctatgttgtttcagttgcattcggcgttggctgactgaacaaagagctcagtgccct
cactgtcgagccccactccagctacgggaacttgtaaactgtcgttgggcagaagaggtt
acgcagcagcttgacacacttcagctatgcaacctcactaagcatgaagaaaatgaaaaa
gacaagtgtgaaaaccatcatgaaaaactcagtgtattctgctggacatgtaagaaatgt
atctgtcaccagtgtgctctctggggaggaatgcatggaggacatacttttaagccacta
gctgaaatttatgagcaacatgtcacaaaagtgaatgaggaggtagcaaaacttcggagg
agactcatggagttgatcagtctagtgcaagaagtggagaggaatgtagaggcagtgcgc
agcgcaaaggatgaacgagttcgggaaattaggaatgcagtggagatgatgattgcccga
ttagacactcaactgaagaacaagcttataacactaatgggtcaaaagacatcactcacc
caagaaactgaacttctggagtccttgctacaggaagtagaacaccagctacgatcatgc
agtaagagtgagttgatatctaaaagctcggagattctgatgatgtttcagcaggttcac
cggaagcctatggcatcctttgtcactactcctgtccctccagacttcacaagtgaatta
gtaccagcctatgactcaaccacctttgtcttggaaaacttcagcactttgcgccaacgg
gcggatcctgtgtacagtccacctcttcaagtgtcagggctttgctggcgactaaaggtt
tatccagatggaaatggagttgtgcgtggttactacttgtctgtgtttctggagctctca
gctggattgccagaaacatccaagtatgagtaccgtgtggagatggttcaccagtccacc
aatgatcctgctaaaaatataattcgagagtttgcctctgactttgaagttggagaatgc
tggggttataacagattctttcgattggacttgcttgccaatgaagggtatttgaacaga
caaaatgacactgtaattcttaggttccaggtgcgttcacctaccttcttccaaaagtgt
cgggaccaacactggtacgttactcagttggaagctgctcagacaagctacatccaacaa
ataaacaaccttaaagagagacttgcaattgagctttcccgtacccaaaaatcacgaggc
atgtcacctccagacactcatcttagcccccagaatgatgatggtccagaaacaagacca
aagaaatctggaccaaatcctgaagtactacttgagagtgtcaccactccagcattagcg
agagatgccaaggatgaggaggaggagaaaatccagcatgaagattttaattatgagctc
tcggatggtgatctggatgtagaccttgctggagaagatgaggtaaaccatctagatggc
agcagctcctctgctagttcaacagctactagtaacactgaagagaatgatattgatgaa
gagactatgtctggagaaaatgatgtggaatataatagtaatatggagctagaagaagga
gatctccaggatgatgctgctgctgctggtggagcatcaggtagtagccatggctatccc
aatgcaagtggcagatcttcaaggcggggaggaagtactttaggctcagcagccagcagc
agtttactagacatagatcccttaattttaatccatttattggacttaaaagacaggaat
gggatggacaatctgtggggtctacagccacgtcctcctgcctcacttctgcagaacaga
gcatcatcctactctctaaaagaccgagaccagcggaggcaccaggcaatgtggcgtgtg
ccacctgacttaaagatgctgaagagactcaaaactcagatggctgaagttcgaagcaaa
atgtctgatgtaaaaaaccagctgtcagaagtaagaagcagcaatgctggctcttgtgag
gggcaacccagcttcctccctggtgatcaggggcctttggctgcgtgtggaacagaaagc
tgcagcaagttacaagaaataggaatggagttgctgacaaaatcatcaattacaagctgt
tacataaagagtttcacgagtaagaaaagtaattcgcccaaagctactcgttccggagca
gcagggagcctgtctcttcgaagagcaatggactgtggggacaataaccttcgctcaaag
ggagactgtcagacttcctctgaaggttgcataggaagctcaaagtctggcagtaggcat
ggctcttccaggtccctgactaatggtaatgctcctgatgcactacctaagccagaggaa
agggagtgcgaaggctcagattctgatgtgggcgtttctgctttaaatggcttaacaact
atggagaagacaagaaaagctgtcgctctggggtcagattctaaaggatgtcatacagaa
ggaacacaaccaactgatcaagagaacaactcggaaactggggagctacaggccattctc
tctgagggcacttcagcagagccagaggaaggttctcctttgctctttgcagctgggcta
tgtcagaagcacgtccttcacctcctgccaggcatgagcagcgatagcgacattgaatgt
gacacagaaaacgaagagcaggaggatgccacatccacttcagatgcgtttaatcatgcc
ttcgatgtccagccctcaagtgaaggatgcagagagcatctgctgtggacggcaggtccc
ctggtcactgcaaagctgtggtatcagagtggtgagttggagaagaggcatgggaacctg
tggcttcagattcaccatcccagttgtgggtga
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integrated database retrieval system
