Trachemys scripta elegans (red-eared slider): 117869706
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Entry
117869706 CDS
T07347
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00310
Lysine degradation
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117869706 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117869706 (SETDB1)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
117869706 (SETDB1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117869706 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117869706 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
117869706
NCBI-ProteinID:
XP_034612648
LinkDB
All DBs
Position
24:complement(6905426..6940542)
Genome browser
AA seq
1287 aa
AA seq
DB search
MDSPEVTELQQEVMEELGISMEELQQFIDEELEKFECVKQRKQQLEELEKNVEQKEAEVA
YVDQLFDDASRAIGKCEILVKDLYSKLGLQYRESSSEDEDSASKPTEVIEIPDEDDDDVM
SIDSGWKHSDTSNRISKDQTLLREAMAAMRKSAQDVQKFMEAVNKKTNAQDLQKDGLSSP
PISGGVSQQVSSALAGGDLSNDGDLVVGMRILGKKRTKTWHKGILIAIQAVGAGKKFKVK
FDNKGKSLLSGNHIAYDYHPSAEKLYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKLRF
LIFFDDGYASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYISAYPNRPMVLLKSGQL
IKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQ
GGQMRTRPNVGAVRSKGPVVQYTQELTGTSTQFKPIEQIQAMSLAAPSVSPQPAEMESPE
SQLAQSRKQVAKKSTSFRPGSVGSGHSSPPSPVLSETPPMGKAAVNQQYRGSYSSGQPGS
SAVQPFHGMMDRVPNEPSYRAPMEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLL
YDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYIFETDCDFLFLEMFCLDPYVL
VDRKFQPYKPFYYIADITKGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVYINTGWEF
LVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRC
KCNTNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKE
GLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDEEEENTGTEEQEESNEDS
SDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEVAVAAACK
LPVSEETSKNKVASWLSSNSMSDSFQDNDSASSFKMNEASEVKAGKVEVLGDREKPSTSG
LGGKEAFGLDADSKMQKKEESEEPNKLSMASEPGKVYGYNPSPMKLEGIRRPPSKTIMHQ
SKRHLAPPQQATDDVLTLSSSTDSEGENGQPAAGQAQGNTNDSDDIQTISSGSEEEDIDD
KKNSSSGLGPVKRQVAVKSTRGFALKSTHGIAIKSTNMASADKGENMLVRKNTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggattctccggaagtaacagagctgcagcaagaagtgatggaggagttggggatctct
atggaggagctccagcaattcattgatgaggagctggagaagtttgagtgtgtgaagcag
cggaaacagcagctggaagagctggaaaagaacgtggaacagaaagaagcagaagttgca
tatgtcgaccagctcttcgatgatgcttcaagagccattggtaaatgcgagatactggta
aaagatctctactccaagctgggccttcagtatcgtgagagcagctctgaagatgaggac
tcagcttccaagcccacggaagtgatcgaaatcccagatgaggatgacgacgatgttatg
agtattgattcgggttggaagcacagtgatacaagtaacagaatctcaaaggatcagacg
ctgcttcgagaagccatggctgcaatgaggaagtctgcccaagatgttcagaaatttatg
gaagctgttaacaaaaaaacaaacgcccaggacctgcaaaaggatgggctgtcctctcca
ccaatctctggtggcgtgtcccagcaggtgagctctgcgcttgctgggggtgacctcagc
aatgacggtgacctggtggttggtatgcgtatcctaggcaagaagaggaccaagacgtgg
cacaaaggaattttgattgcaatccaggcagtaggtgctggtaagaagttcaaagtgaaa
ttcgacaacaaagggaagagcttgctttctggcaatcacattgcgtatgactatcatccc
tctgctgagaaactctacgttggaagccgggtcgtggccaaatacaaggatgggaatcaa
gtctggctctatgctggtattgtggccgaaacaccgaacatgaagaataaactgaggttc
ctgatcttctttgatgatggctatgcttcttacgtcactcagtcggagctatacccgatc
tgcaggccactaaagaagacctgggaagacatagaagacgtttcctgtcgtgatttcata
gaggagtacatcagtgcctacccaaaccgtcccatggtattgctgaagagcggccagctg
attaaaacagaatgggaagggacctggtggaaatccagagtggaggaagtggatggcagt
ctggtcaaaatcctcttcctggatgacaaacgctgtgaatggatttaccgtggttccacg
cgcctggagcctatgttcagcatgaaaacctccacggcctccactctggaaaagaaacaa
ggagggcagatgaggactcgtcccaatgttggtgctgtgaggagcaaagggcccgtagta
caatacacgcaagaattaacaggaaccagcacccagtttaaacctatagaacaaatccaa
gcaatgtctctagctgcaccgtctgtttccccacagcctgctgagatggaaagccccgaa
agtcagctggctcagtccagaaagcaagtggccaagaaaagcacgtccttccgtcctggc
tctgtggggtctggacactcttcacctccttctcctgtgctaagtgaaactcctcccatg
ggaaaagctgcagtgaaccagcagtatcgtggaagctattccagtggccagccaggcagc
agtgcagtgcagccattccacggcatgatggaccgggtgcccaatgagccctcctaccgg
gccccgatggagaagctcttttacctgccccacgtctgcagctacacctgcctgtcgcgg
gtccgccccatccggagcgaccagtaccgcagcaagaaccccctcctcatcccgcttctc
tacgacttccggcgcatgactgcccgccgccgcgtcaaccgcaagatgggcttccacgtc
atctacaagacgccatgcgggctgtgcttgcgcaccatgcaggagatcgagcgctacatc
ttcgagacggactgtgacttcctcttcctggagatgttctgcctagacccctacgtgctg
gtggaccgcaagttccagccctacaagcccttctactacattgcagacatcaccaaaggc
aaggaggacgtgccgctgtcctgtgtcaacgagatagacaccacccctcctccgcaagtg
gcttatagcaaggagcgcatcccggggaaaggggtctacatcaacaccggctgggagttc
ctcgtgggctgcgactgtaaagatggctgcagagacaaatctaaatgtgcctgccaccag
ctgacagtccaagcgacaggctgcacccccggtgggcagatcaaccccaattctggctac
cagcacaagaggctggaggaatgcctccccacaggagtctatgaatgtaacaagagatgc
aaatgcaacacgaacatgtgcaccaatcgcttggtacaacatggactccaagtcagactc
cagctattcaagactcagaacaaaggctggggaatccgctgccttgacgatattgccaag
ggctctttcgtctgcatctatgcagggaaaatcctgacagacgactttgccgacaaagaa
gggctggagatgggggacgagtacttcgccaacctggatcacatcgagagcgtggagaac
ttcaaggagggctacgaaagcgatgccaagtgctcctctgacagcagtggcgtggacctg
aaggacgaagaggaagagaacaccggcaccgaggagcaggaggagtccaacgaggacagc
tccgacgacaacttctgcaaggacgaggatttcagcaccagctcggtgtggcgcagctat
gccacccgccggcagacccggggccagaaggagaacggcctgtctgagacagcctccaag
gactccggcctcaccaggcagatcagccacgacgaggtcgccgtggccgctgcctgcaaa
ctgcccgtgtccgaggagacctccaaaaacaaagtggcctcctggctgagctccaacagc
atgtcggacagcttccaggacaacgatagtgcctcctcgttcaagatgaacgaggccagc
gaggtcaaggcaggcaaagtggaagtcctgggtgaccgagagaagccctccacttctggg
cttgggggcaaggaggcctttggcttggatgccgactcaaagatgcagaagaaggaggaa
tctgaagagccaaacaagctttcgatggcatccgagcccggcaaggtgtatggctataat
ccaagccccatgaaactcgaggggatccggaggccaccaagcaagaccatcatgcatcag
agcaaaaggcacttggctcctccccagcaagcaactgacgatgtgctgacgctgtcaagt
agcacggacagcgagggggagaatggccagccggcagcaggacaagcacagggcaacacg
aatgatagtgatgacatccagactatttcctctggctcagaggaagaggacatcgacgac
aagaagaattcctcttccggtctaggccccgtgaaaaggcaagtggcagtgaagtccaca
cggggttttgccctcaaatcgactcacgggatcgccataaagtcgaccaatatggcatca
gctgacaagggggagaacatgctagtgcgcaaaaacacccgccagttttatgacggcgaa
gagtcctgctatatcattgatgccaaactcgaagggaacctcggccgttacctcaatcat
agctgcagccccaatctgtttgtgcagaatgtctttgtggacacacatgatctccgtttc
ccttgggttgccttcttcgctagcaagcggatacgagccggcactgagctgacctgggac
tataactacgaggtaggcagcgtggagggcaaggaactcctgtgctgctgtggagctatc
gagtgccgcggcaggctgctctaa
DBGET
integrated database retrieval system
