Trachemys scripta elegans (red-eared slider): 117870273
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Entry
117870273 CDS
T07347
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
tst04145
Phagosome
tst04218
Cellular senescence
tst04514
Cell adhesion molecules
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117870273
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117870273
04145 Phagosome
117870273
09143 Cell growth and death
04218 Cellular senescence
117870273
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117870273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117870273
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117870273
Exosome [BR:
tst04147
]
Exosomal proteins
Proteins found in most exosomes
117870273
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Antigens
117870273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_3
C2-set_3
ig
DUF3042
EphA2_TM
DAG1
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117870273
NCBI-ProteinID:
XP_034613254
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLPLLLLLGAAAIQGGYANPGPDPHSLRYFFTGVSEPGPGLPPFITVGYVDDQLFMDYSS
ERGSAEPRAEWMARSEGPEYWQRETQGLQGWQAQFRVDLNTLRGRYNQTGVHTLQLTYGC
ELRADGSKGGFYQFAYDGRDFLSLDKDRETWVAADDAARITKHKWDADRSFTQGERAYLE
QTCIEWLGKYLEYGKETLQRREPPQVHVSDRPSQDGLTTLSCRVHGFYPRNVAVVWLKKG
VAVPQETLQWGVVPSGDGTYQTRATIEIDPSSETDYTCCVEHPSLTADLRVPWGSKFNVM
LIVGVVIGVLVLVAAIVGAVVFLRKKRDGYKAAAAHDGSASSGSNQGSDTRVNA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgctcttgctgctgggggctgcggccatccaggggggctacgccaaccca
ggcccagacccgcactcgctgcgctatttcttcacgggggtgtcggagcccggcccgggg
ctgcccccgttcatcacagtcgggtacgtggacgatcagctgttcatggactacagcagc
gagcggggcagcgcggagccacgcgcggagtggatggcgcggagcgaggggccggagtac
tggcagcgggagacgcagggcttacagggctggcaggcccagttccgggtggacctgaac
acgctgcgcgggcgctacaaccagaccggggttcacacgctccaactgacgtacggctgt
gagctccgggctgacggctccaaagggggtttttaccagtttgcctacgacgggcgcgac
ttcctcagcctggataaggaccgggagacctgggtggcggcagatgacgcagctcggatc
accaaacacaaatgggatgctgacaggagcttcactcagggagagagagcttacctggag
cagacctgcatcgagtggctggggaagtacctggagtacgggaaggagacgctgcagagg
agagagccaccgcaggtgcacgtgagcgaccggccgagccaggatgggctcaccaccctc
tcctgccgggtccacggcttctacccgcggaacgtggccgtcgtgtggctgaagaagggg
gtggccgtgccgcaggagacgctccagtggggggtggttcccagcggggacgggacctac
cagacccgggccaccattgagatcgaccccagcagtgagaccgattatacctgctgtgtg
gagcaccccagcctgactgcggatctgagagtgccctgggggtccaagttcaacgtgatg
ctgatcgtgggtgttgttatcggggttcttgtgctggtcgctgccatcgttggagccgtt
gtcttcctcaggaagaagagagacggctacaaagcggctgcagctcacgatggctctgcc
agctccggaagcaaccagggatcggacacccgtgtcaacgcgtaa
DBGET
integrated database retrieval system
