Trachemys scripta elegans (red-eared slider): 117871016
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Entry
117871016 CDS
T07347
Name
(RefSeq) complement C4-like
KO
K03989
complement component 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117871016
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117871016
Peptidases and inhibitors [BR:
tst01002
]
Peptidase inhibitors
Family I39: alpha2M family
117871016
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117871016
Exosomal proteins of other cancer cells
117871016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M
A2M_BRD
NTR
A2M_recep
MG2
MG4
MG1
MG3
CO4A-B_CUB_C
ANATO
ParB_C
C4_MG1
TEP1_CUB2
Transglut_C
C3_CUB2
DUF7611
Motif
Other DBs
NCBI-GeneID:
117871016
NCBI-ProteinID:
XP_034614461
LinkDB
All DBs
Position
1:complement(293449251..293538599)
Genome browser
AA seq
1691 aa
AA seq
DB search
MERLVFVLSICAFLRNAEQAPSFLITAPNVVHVGEYETITVQVHRAQSSVKVTVYFKDEI
NNELLSDMTVFTLNQENNYQEMKKIMVKPDLMPEDMFKKRRKPYILLVAESKELFKEHAQ
HTRILLSSKKGYIFIQTDKPIYTPNTKVKYRIFTLDNAMKPANEKIQVIVLNSKGMVVKK
SALQTKPMTSGHFVIPDIADPGNWKILAWFDGYEMSNSSAEFEVKKYELPSFEIKLIPLE
PYYHIWNKTFTFDIYATHSYGKGIDGVAYVRFGIIEETDKKIFLPGLEQQPSIQNGKGTV
TLSTKSLEEKITKNITVLEGHFLYVSVTVIETASGEIQEEELSNVKFVKSPYTIDLSNTK
QYFVPGAPFSVVASITSADGSPAADVSVTATLTRDRKDPKKKTALSSKEGLVSFVFNIPR
AAEKLQIMVRAEEGKPGMESAGTKTTAERYQSANQNYLSISIPHAVIAPGDTLQVTLKDV
HRSSSSNIDYFYYMVVTKGKVEVMGRVPYANKIITLDVTEKMVPAFRFIAYYFVKNQRHS
EIVADSVWLDIVDACEGKIKLKTDRDTYEPTELVNLSIDTDHAGTVALAVVDTAVFILNR
KNKLTAKKVFEAMNSYDLGCSVGGGANSAQVFNDVGLAFISDTIKSHFRQGYKCSPATRR
QKRSLDFHKQISGIANKYQDPALRKCCHDGMKLNPMRFSCAKRLTRVTGSIKCKEAFKYC
CERAQSLRRELEEKKLASALARIGDVPEEDVFDETSINLRSVFPESWWWETVEIKEPGQH
RVTNAIPDSITTWEIQAISISPQKGFCIADPKTFKVFKDFFLSIRLPYSVKRYEQLEVKA
VVYNYLSEDLKVTVKMITVEGVCSAGTSTKDVQQKLTVKGNSAVPAYFSVVPLTVGEIPI
TITAFDPISGHSDSVMKKLKVVTEGILQTEEETICINNNFRSLVLDMKKPSDMIPESESH
VFMSVKGDIMGESIQNCLSPAGIDKLIKVPTGCAEQTMVTMAPATYAIEYLDASEQWINF
KPERKEEAHNMIAQGYTRLLEFQKEDGSYGAFKKTPSSTWLTAFIAKVLTRCRKYISVED
RYIHKAVSYLLGQQQADGSFRDPHPVMDRLMQGGVGKAEEHLALTAFITIAMQEALGAFD
DSKSSEVKQGIEKAVAYVHRQLSPQLNFYSVAISAYALALVKHDSSEAKRAEHILREIST
LDAAMQQRYWGNGEDAVSIEATAYALLQTLLQKDIKYAEPIATWLTEKRKYGGGYCSTQD
TVVALEALSQYSIQTIESDPTILNLALNLPGRHKKHYFNLNSNNVQIQEELQFDLGSKVE
VTVKGKGNGTLSIQKIYYSVEKENNTCNDLILKVEMEGNVKYSSALDAEGEDYDYGQDHA
METRRDEPISQIEWFDIRNRRKREVPVPGKTESLRYKVCVRSTGPNIPKMSLVDLSLLSG
LEPDTTELEQLVKSTDQYIDHFEYKEGKVLLYFGELSNGSKPDCVSFGAKQINPMGLVQP
ANAIIYDFYNPGRKCSIFYSAPRQSAMLSKLCHAEVCQCAEGPCPRRRMTFNKAMTEDTR
ESFACYHPVVDYAYHVEILGMTQKNAFNYYETKIQRILKVAGDETIQIGDLRQFLKRSSC
ELKVEAGKQYLLMGKDGQTIDCNNKMQYFLDSQTWIEEIPDGNTCKATTRRKPCVDLHDF
MNEYEINKCNI
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggctggtatttgtgctgagcatttgtgcattcttgcgcaatgcagaacaagcg
ccatcatttcttattactgcaccaaatgtggtacatgtgggagaatatgagacaataact
gttcaagtacacagagcacagagctctgtcaaagttacagtatatttcaaggatgagata
aataatgagctactatcagacatgactgtctttactctcaatcaagagaacaactatcag
gaaatgaaaaaaattatggtcaagcctgatttgatgcctgaagatatgttcaagaaaaga
cgaaaaccgtatattctgctagtcgctgaaagcaaggagctttttaaggaacatgctcag
cacactcgcatcctcctgtcttccaagaagggctacatttttattcagacagataaacct
atatacacacctaatacaaaagtcaaatacaggatcttcaccttggacaatgcaatgaaa
cctgcaaatgagaagattcaagtcattgtactaaattcaaaaggaatggtggttaaaaaa
tcagcgttgcagacaaagccaatgaccagtggacattttgtgatacctgacattgcagat
cctggaaactggaaaatcctggcctggtttgatgggtatgagatgtccaatagttcagct
gaatttgaagttaaaaaatatgaacttccatcttttgaaatcaaacttatcccattagag
ccatattaccatatttggaacaagacctttacatttgatatttacgcaacgcactcttat
ggaaaagggatagatggtgttgcatatgtgcgatttggcataatagaggaaactgataaa
aaaatctttctcccaggcctggaacaacagccttcaatacaaaatggaaaaggaacagtc
acgttaagtaccaaatctttggaagagaaaataacaaagaacattactgttttggaaggg
cattttttatatgtctctgttacagttattgaaactgcaagtggtgaaatccaggaggaa
gaactcagtaatgtgaagtttgtcaaatctccttatactatcgacctgtccaacaccaaa
caatattttgtgcctggggcacctttctctgttgtggcatctataacttctgctgatggc
tctcctgctgctgacgtgtctgttactgcaactcttacccgagatagaaaagacccaaag
aaaaagactgcactttctagtaaagaaggtctagtatcctttgtattcaacattcctcgt
gctgcagagaagctacaaatcatggtgagggctgaagaggggaagcctggcatggaatca
gctggaaccaaaaccactgctgagagataccagtctgctaaccagaactaccttagtatc
agcattccacatgctgtcatagcacctggagacactttacaagttaccttgaaggatgtc
caccggtccagcagcagtaacatcgactatttctattacatggtggtgacaaaggggaaa
gttgaggttatgggaagggtcccttacgcaaacaaaataatcaccctggatgttactgag
aaaatggtgcctgcatttcgctttattgcttactacttcgttaaaaatcaacgccacagt
gagattgtggctgactctgtgtggctagacattgtggatgcctgtgaaggaaagattaaa
ctgaaaacagaccgagacacatacgaaccaacagaactggtaaatttatccattgacaca
gatcatgcaggaactgttgccttagctgtggtcgatactgcagttttcattctgaacaga
aagaataagcttacggccaaaaaagtctttgaagcaatgaattcatatgatcttggatgc
tcagtgggcggaggtgctaacagtgctcaagttttcaatgatgtgggtctggcctttata
tcagacacaattaaatcacattttcggcaaggttataagtgttcccctgctaccagaaga
cagaaaagatcattggattttcacaagcaaatttcaggaattgctaacaaataccaagat
cctgctctacgaaagtgctgtcatgatggaatgaaattaaatccaatgaggttttcttgt
gccaaaaggctaactagagttactggctcaataaaatgcaaagaagctttcaagtactgt
tgtgagagggctcagagcctaaggagggagctggaagagaagaaactagcttctgcattg
gcaagaattggtgacgttccagaagaagacgtgtttgatgaaacttcaatcaacttgcgc
agtgtctttcctgagagctggtggtgggagacagtagaaattaaagaacctggacagcat
agggtaacaaatgctattcctgactctataactacttgggaaattcaagcaataagtata
tcacctcaaaaaggtttctgcatagctgaccccaagacctttaaggttttcaaagatttt
tttttatcaataaggttaccatattcagttaaacggtatgagcaactagaagtaaaagca
gttgtctacaactacctttctgaagatctcaaggttacagtgaagatgatcactgtggag
ggagtgtgcagtgcagggacatcgacaaaggacgtgcaacagaaactaactgttaaggga
aactcagcagtgcctgcctatttctcagtagttccactcactgtaggggaaattccaatt
accattactgcttttgacccaatttctgggcacagcgatagtgttatgaagaaactcaaa
gttgtgactgaaggcattttacagacagaagaagagaccatttgcattaataataatttt
agaagccttgttcttgatatgaagaaaccctctgatatgataccagagtctgagagccat
gtctttatgagcgtgaaaggggatataatgggtgagtccattcaaaactgtctcagtcca
gctggaattgataagcttatcaaagtgcccactggttgtgctgagcaaactatggtgaca
atggctccagcaacgtatgccattgaatacctggatgcaagtgaacagtggatcaacttt
aaacctgaaaggaaagaagaagcccataacatgattgcacaaggttacacgagacttctt
gaatttcagaaggaggatggctcttacggagcattcaaaaaaactcccagcagtacatgg
ctaactgcattcattgctaaagtgctcacaaggtgcagaaaatacatcagtgtcgaagac
cgttacatacacaaagctgtttcctacttgcttggacaacagcaggcggatggctcattc
cgtgaccctcacccagtgatggacagacttatgcagggtggagttgggaaagctgaagaa
catttggctttgacagcctttataaccatcgctatgcaagaggccttgggggctttcgat
gactctaagtcttctgaggtgaaacaaggcattgaaaaagctgtcgcttacgtgcataga
caactctcacctcagctgaacttctactcagttgcaatctctgcctatgctctggctctt
gtgaaacacgatagctcagaagccaaacgggcagaacatattttaagagaaatttctaca
ctcgatgcagcaatgcaacagcgctactggggaaatggtgaagatgcagtttctatagaa
gctaccgcttacgcattacttcagacgttactccagaaggatatcaagtatgcagaacct
attgctacatggttaacagaaaaaaggaaatatggtggcggatactgttctacacaggat
acagtggtggccctggaagctttgtcacagtatagcatacagactatagaaagcgatccc
accattctgaaccttgcattaaacctacctggaaggcacaaaaagcactattttaacctg
aatagtaacaatgtccagattcaggaagaactacagtttgacctcggaagcaaagttgaa
gtgacggtaaagggcaaaggaaatgggacgctgagtatacaaaaaatatattattctgtt
gagaaggagaacaacacctgtaatgacttgattctgaaagttgaaatggaaggaaacgtc
aaatattcaagtgctctggacgctgagggagaggactatgattatgggcaggaccatgcg
atggaaaccagaagagatgagcccataagccagatagaatggtttgacatccgcaataga
aggaaaagagaggtgcctgttcccggtaaaacagaatcattacgatacaaagtctgtgtc
aggtccacaggtcccaatataccaaagatgtctctagttgatctctcacttttaagtggc
ttggaacctgacacaactgaacttgagcagttggtaaagtctacagaccaatacatcgac
cactttgagtacaaagaaggaaaggttttgctctactttggagagctcagcaatggatcc
aaaccagactgtgtgtcatttggggctaagcaaatcaatcccatgggtctagtacagcca
gcaaatgccatcatttatgatttttacaaccctgggagaaaatgcagtatattttacagt
gcacccagacagagtgccatgttatcaaagctgtgccatgcagaggtttgccagtgtgct
gaaggtccctgtccacgaagaagaatgactttcaataaagccatgacagaggatacacgg
gaaagttttgcatgctaccaccctgttgtagactatgcataccatgtagagatcctgggg
atgacccaaaagaatgcttttaattactatgagaccaaaatccaaagaatcctaaaagtc
gctggtgatgaaaccatccagataggtgatctccggcagttcttaaagcgttcatcttgt
gaattaaaggtggaggctggcaaacaataccttctaatggggaaagatgggcaaactatt
gactgcaacaacaagatgcagtacttcctcgattcacaaacttggatagaggagattcca
gatggtaacacatgcaaagccaccactcgccgaaaaccttgtgttgacctccatgatttt
atgaatgagtatgagataaacaaatgcaacatttga
DBGET
integrated database retrieval system
