Trachemys scripta elegans (red-eared slider): 117871265
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Entry
117871265 CDS
T07347
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
KO
K06752
MHC class II antigen
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
tst04514
Cell adhesion molecules
tst04672
Intestinal immune network for IgA production
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117871265
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117871265
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117871265
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117871265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117871265
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117871265
Exosomal proteins of epithelial cells
117871265
Exosomal proteins of breast milk
117871265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
Psg1
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
117871265
NCBI-ProteinID:
XP_034614975
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Position
1:complement(329798795..329806246)
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AA seq
282 aa
AA seq
DB search
MAPGGIPGVARNCWAGALIVAIALRTHRAHCTDPPEHFLLQEKSECHYTNGMQRVRYLKR
LIWGQQEICYYDSDLGFSVARTELGRPIAEYWNRLEWLSYLWASVEKFCSYNHRRFKNIT
VGRRVKPRVKISTLKAESSHRPSLLVCSATGFYPSEIATKWFKNGQEETAGVVSRELLHN
GDWTFQIQVTLETKPRWGEVYTCQVEHISLQTPITMQWVAQPDSAKSKMFIGIGGFVLGL
SFMVLGLLVYQKNKKGYPCLDTAESQAAGSDRGSSTNLLLCA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcccccggggggatccctggggtcgccaggaactgctgggctggggctctaatagtg
gcgatagcactgagaactcacagagctcattgcacagaccctccagagcatttcctgctg
caggagaagtctgagtgtcactacaccaacggcatgcagcgggtgaggtatctgaaaaga
ctgatctggggccagcaggagatctgttactatgacagtgacttgggcttctcggtggcc
cgcacggaactgggtcggccgatcgcggagtattggaacaggctggagtggctgagctac
ttgtgggcttcagtggagaagttctgcagttataaccataggagatttaagaacatcact
gtgggtaggcgagttaagcccagagtgaaaatttccaccctgaaagcagagtcttcccac
cgccccagcttgctggtttgctctgcgacagggttttatccttccgagatagcgaccaag
tggttcaaaaatgggcaggaggagacagctggagttgtatccagggagctgctacataat
ggagactggaccttccagatccaggtgacgctggaaacaaaacccaggtggggagaggtc
tacacctgccaagtggagcacatcagcctgcaaacgcccatcaccatgcagtgggtggca
cagcctgactctgccaagagcaagatgttcattggaattgggggctttgtactggggttg
agcttcatggtgctgggactcctcgtctaccagaagaataagaaagggtacccgtgcttg
gacactgcagaatctcaggctgctgggagtgacaggggcagctctacaaacttactgctc
tgtgcctaa
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