Trachemys scripta elegans (red-eared slider): 117874259
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Entry
117874259 CDS
T07347
Symbol
WDPCP
Name
(RefSeq) WD repeat-containing and planar cell polarity effector protein fritz homolog
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117874259 (WDPCP)
Cilium and associated proteins [BR:
tst03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
117874259 (WDPCP)
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Gene cluster
GFIT
Motif
Pfam:
Frtz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
117874259
NCBI-ProteinID:
XP_034620086
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Position
3:complement(15948113..16198142)
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AA seq
718 aa
AA seq
DB search
MSFCLTEMHLWSLKNTLHVGDEDIGIYQYYDKKEPVSQTNHGYLEEKQQLVESRDYPWIL
KNKRPEKLRDALKELEELMQNSQCVLSKWKNKYVCQLLFHSGVLVSLSLSGPQLEKVVID
RTLAGKLISDTISDAVLTDSFIILSFWEQNKLCFIQFTKKTGSPDVNKRLEKLSSLDFKI
SYIDIPGPASRRIKRHLSINCIQDMVICWWSLTNDGAWPWSPISSERDRANLLLLGCAHG
RLEVLSYIHTEWDPLDASFSTNQPYQVHTVEHSISADKEPMADSCIYEWVRNKLQCMAVT
RIPLRSKAISCCRNIAEDKLVLGCEDSSIILYEAHQRVTRLAQAELLPSLINYHPSGAIF
LVGSSQGELQLFDMALSPIKIQLLTEDCSPKATLQFSKRFDVSSSLIQIQWAAPHTASDS
DNSMDVHDLLLIRFDKGPLGVLQFKLGVITRGRLGLVEIIHQYVRYDEIYEAISVLSSMN
WDTMSHQCHISMSAIVNHLLRQKLTPEREAQLEASLGTFYAPTRPLLDTTVLEYRDPISR
YARRFFHHLLRYQRFEKAFLLAVDIGARDLFMDIHYLAVDKGELALAEVAKKKANDIDAE
SITTGVALLGHLDREDSSDEAFLALSLTSQEEQTFQDALPPSGSNFRHTAQSSSNSSATR
RQRDTRESALGMESNAASAMDKPLSWNPAASSGNFGDIHTEQETGGSGSLKVVHFGLV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctgcctgactgagatgcacctgtggtctttgaagaataccttacatgttggg
gatgaagacattgggatctatcaatactatgacaagaaagaaccagtatcacaaacgaac
catggttacttagaagagaaacaacagcttgtggaatctcgagattatccttggatactt
aaaaacaaacgcccagaaaaactgcgcgatgctctcaaggagctggaggagctgatgcaa
aacagtcagtgtgtgctgagcaaatggaagaataaatatgtctgtcagctcctctttcat
tcaggtgtactggtgtccctaagcctttctgggccacagctggagaaagtggtgattgac
aggaccctggcagggaagctcatctccgacaccatcagtgatgctgttcttacagacagt
ttcatcatcttgtcattttgggagcaaaacaaactctgcttcattcagtttacaaagaag
acaggttctcctgatgtaaacaaaagactggaaaaactctcatccttggattttaagatt
tcttatattgatatacctggaccagcaagtagaaggataaaacgtcacctgtcaataaat
tgtatccaagatatggtcatttgctggtggtcactgactaatgacggagcgtggccttgg
tctcctatttccagtgagagggacagagccaacttgttgttattaggctgtgcgcatggc
agactagaggttctgagttacatccatacagaatgggatccacttgatgctagctttagc
actaatcagccttatcaggttcacacagtggagcactctatcagcgcagacaaagagccc
atggctgacagctgcatctatgagtgggttaggaacaaacttcagtgcatggcagtcacc
agaataccactaagatccaaggccatcagttgttgcaggaacattgcagaagacaagctg
gtcctgggctgtgaagattcttcaataattctgtatgaagcccaccagagagtgactcgg
ttagcccaggcagaactattgccttctttaataaactaccaccccagtggagccatattt
ctggttggcagctctcaaggggagctgcagctttttgacatggcactgtccccaattaaa
atacagcttttgacagaagactgctcacctaaagcaactttgcaattcagtaaacggttt
gatgtgtctagcagcctcatccagatacaatgggcagctcctcacaccgcgtctgacagc
gacaacagcatggatgttcatgaccttctattaattcggtttgacaaaggacctttagga
gtacttcagtttaaacttggtgtcatcacaagaggacggctgggccttgtggaaatcatc
caccagtatgttcgttatgatgagatatatgaggcgattagtgtcctgagcagcatgaac
tgggacactatgagtcaccagtgtcacataagcatgagtgccattgtaaatcaccttctt
cgacaaaagctgacaccagagagagaagcacagcttgaagcaagccttggaaccttttat
gctccaacaagacccctgttggatacgactgtgttggaatatagagacccaatcagcaga
tatgcaagaaggttcttccaccacctgctcaggtatcagagatttgaaaaggcatttctg
ctcgctgttgacataggtgctcgtgacctgtttatggacatccattaccttgcagtagat
aagggtgaattggcactagctgaagtggcaaagaaaaaagctaacgacattgatgcagaa
tcaataactacgggagttgctcttttggggcatttagacagagaggattcttcagatgaa
gcttttctcgccctatctctaacatcgcaagaggaacagacatttcaggatgccctcccc
ccctctggctcaaacttcagacacacagcacagagcagttctaacagttctgctacccgt
agacaaagagacaccagggagagtgcgctcggaatggagagcaatgctgcttctgcaatg
gataaacccttgtcctggaatccagcagcaagttcagggaattttggggacattcacaca
gaacaggagactggaggaagtggatctctcaaagtggttcactttggtctagtataa
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integrated database retrieval system
