Trachemys scripta elegans (red-eared slider): 117874520
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Entry
117874520 CDS
T07347
Symbol
PSEN2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117874520 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117874520 (PSEN2)
Peptidases and inhibitors [BR:
tst01002
]
Aspartic peptidases
Family A22: presenilin family
117874520 (PSEN2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
117874520
NCBI-ProteinID:
XP_034620604
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All DBs
Position
3:51707201..51736728
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AA seq
459 aa
AA seq
DB search
MMITFMNSSDSEEEACNERTSLISVESPPAASYQDGLQAPEAAETQTYRKRHTGGSCSPS
DADSGNSDSGLPVRDIAVDNKEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTE
KNGQLIYTPFSEDTPSVGQRLLNSVLNTIIMISVIIVMTVFLVVLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYLTLFFVIWNFGAVGMICIHWKGPLHLQQAYLIM
ISALMALVFIKYLPEWSAWVILGAISIYDLIAVLCPRGPLRMLVETAQERNEPIFPALIY
SSAMVWTVGMAKQDAASRSLTQQTWDSAEDMRNIHDNPAYVESENAEARSPAPTHPTTSL
LEELEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVF
KKALPALPISITFGLVFYFSTDNLVRPFMDTLASHQLYI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcacgttcatgaacagctcagacagtgaagaggaagcctgcaatgagagaaca
tcactgatatcagtggagagccctcctgcagcctcctaccaggatggcctgcaagcacca
gaagcagcagaaacgcagacgtacaggaagaggcatactggtggcagttgtagccctagt
gatgctgacagcggtaattctgactcaggacttccagtaagagacattgctgtggacaat
aaagaggaggaactgaccctgaaatatggagcaaagcatgtgatcatgctctttgtgcct
gtcacgctgtgtatgattgttgtcgttgccaccataaagtcagtgcgcttctacacagag
aaaaatgggcagttgatctacactcctttcagtgaagatacaccttcagtgggccagcgt
ctcctgaactccgtgctgaataccatcataatgatcagtgttatcatcgtgatgaccgtg
ttcctagttgtgctgtataaatatcgttgttacaagtttatacacggttggctgattctt
tcatccctgatgctgctgttccttttcacctacatctatctaggcgaagtgctgaagacc
tacaacgtggctatggattacctcaccttgttctttgtcatctggaattttggagcagtt
gggatgatttgtatccactggaagggtcccttgcacctccagcaggcctatctcattatg
atcagtgcactgatggcattggttttcattaaatatctacctgaatggtcagcgtgggtc
attctaggagccatttccatttatgatctgattgctgtgctgtgtcccagagggccattg
agaatgctggtagaaactgcacaggagagaaatgaacctatatttcctgcattaatatat
tcttctgctatggtgtggacagtaggaatggcaaagcaagatgcagcatcaaggagcctt
actcagcagacatgggattcagctgaagacatgagaaacatccatgacaatcctgcgtac
gtggagtccgaaaacgctgaggccaggagtccggctccaacccatccaaccacttcctta
ttagaggagctggaagaggaggaaaggggtgtcaagctgggccttggagacttcatattt
tacagtgtgcttgtagggaaagcagctgccactgctagcggagactggaatacaacactg
gcctgttttgtagccatccttataggtttatgcctgactcttttattgctggctgtgttc
aagaaagcattgcctgctcttcccatctccatcacctttgggttggtattctacttctca
acagacaacctggtgcgacctttcatggacacccttgcatcccaccagttgtatatttaa
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