Trachemys scripta elegans (red-eared slider): 117874547
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Entry
117874547 CDS
T07347
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117874547 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117874547 (BABAM2)
03036 Chromosome and associated proteins [BR:
tst03036
]
117874547 (BABAM2)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117874547 (BABAM2)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117874547 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
117874547 (BABAM2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
117874547 (BABAM2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
117874547 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
117874547
NCBI-ProteinID:
XP_034620670
LinkDB
All DBs
Position
3:complement(54701312..55025338)
Genome browser
AA seq
407 aa
AA seq
DB search
MLRLFLLPRSDCRAQYSRKEGQVKMSPEVALNRISPALSPFISNVVRNGKVGLDATNCLR
ITDLKSGCTSLTPGPSCDRFKLHIPYAGETLKWDIIFNAHYPELPPDFIFGEDAEFLPDP
SALHNLASWNPSNPECLLLVVKELVQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENME
IYAGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEAAQVF
PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIA
AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNS
GQLYSQAQKNYPYSPRWDGNEMAKRAKAYFKTFVPQFQEAAFANGKL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggctttttctactgccccgtagtgactgcagagctcagtacagcaggaaagaa
ggacaagttaaaatgtctcctgaagttgctctgaacagaatttcaccggcactctctcct
ttcatttccaatgtggtcagaaatggaaaagtaggattggatgctactaactgtctaaga
attacagacctgaaatcaggctgtacctctttgacgcctggacccagctgtgatcggttt
aagttgcatatcccatatgctggagaaacactcaaatgggatataattttcaatgcccac
tacccagagctaccaccagattttatctttggagaggatgccgaattcctgccagatccc
tctgccttacataatttagcctcctggaatccctcaaatcctgaatgtctcctgcttgtt
gtgaaagagctcgtccagcagtatcaccagttccaatgcagccgattacgggagagctct
cgcctcatgtttgaataccagactttacttgaagaaccccagtatggagaaaacatggaa
atttatgctggcaaaaaaaacaactggactggtgaattctcagctcgcttccttttaaag
ttaccagtggatttcagcaatattcccacataccttctcaaggatgtgaatgaagatcca
ggagaggatgttgctcttctttcagtcagttttgaggatacagaagctgctcaggttttc
cccaagctatatctgtccccacgtattgaacatgctcttggaggctcctctgcccttcac
atcccagcctttccaggtggaggctgtctcattgactatgtaccgcaggtgtgccagctg
ctaactaacaaggtacaatatgttattcagggataccataagagaagggagtatattgcc
gctttcctgagtcactttggaactggtgtggtggaatatgatgcagagggcttcacaaag
ctcacactgttgctgatgtggaaagatttttgcttccttgttcacattgacctacctctg
tactttcctcgagaccagccaactctaacatttcaatcagtctatcacttcactaacagt
ggacagctgtattcccaggcccagaaaaactacccttacagcccacgctgggatggcaat
gagatggccaagagagcaaaggcttatttcaaaacgtttgtccctcagttccaagaggca
gcttttgccaatggaaagctgtag
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integrated database retrieval system
