Trachemys scripta elegans (red-eared slider): 117874897
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Entry
117874897 CDS
T07347
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117874897 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117874897 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117874897 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117874897 (TNFAIP3)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117874897 (TNFAIP3)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C64
117874897 (TNFAIP3)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117874897 (TNFAIP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
117874897
NCBI-ProteinID:
XP_034621453
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All DBs
Position
3:complement(102189672..102210107)
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AA seq
804 aa
AA seq
DB search
MACQQVLPQALYLSNMLKAVKIRERIPEDLVIPTNGIIHHFKTMYRYTVEMFRMCQFCPP
FREILQKALIDRSTQSSLEHQRKLNWCREVRKLVPLKTNGDGNCLLHAASQYMWGVQDVD
LVLRKTLFFALQEVDTRNFKLRWQLETVKSQDFVETGLLYNTRNWEEEWENLISMTSPET
SVARSGLQYNALEEIHIFVLVNILRRPIIVLADKMLRSLESGSSFAPLNVGGIYLPLHWP
AEECYRYPIVLGYDRMHFTPLVTLKDSGPEIRAVPLVSSERGRFEDLKVHFLTDTEEMGK
EKLLKEYLMLIEIPVQGWDHGTTHLIYAAKLDEGNLPKEINLVEDYFQLVQHEYKKWQKN
NTLITREPYTGNILELSLPQLSLVEVKCETPNCPFFMSVNTQPYCHECFERRQQGNKPRR
PSAKTASEKSRTTGAGPSRVEFCEPGGGLSEEPVTGPHSAPPTAPSLFLYSETTAMKCRT
PDCPFTLNVQHNGLCERCYNSRQLSPSNNLDNLRHLNSVTCKICLQDTNRTFNGICTSCL
KRTTEPSIANPVFVPSFHRRSHSDPSQLSQSFLQHSCHAAPSNELEEPSSSEMLQVPHNS
LERNGSSQCRKPGCTFFGTPQNEGFCTLCFFEYKENNGSASLLHQRRSQRNSSASGQPGT
SAATFHNTISCLGRECGTLGSSMLDGYCQKCFIEAQTQRFREAIRTEQQLVGQSERTGQH
RDLLVSTMGSQKRKCSTASCRNNLACRNDELCQECQRVQSGNPRGPAAEEPPKQCCRATG
CDHYGNNKCNGYCNECYQFKEMYG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcttgccaacaagttcttccccaagctttgtatctgagcaatatgctgaaagccgtg
aagattagggagagaattcctgaagaccttgtcatacccaccaatggaataattcatcac
tttaaaacgatgtacagatacacagtagaaatgttcagaatgtgccagttttgtcctccg
tttcgggagatccttcagaaagctttaattgaccgatccacccagagttcgctggaacat
cagaggaagctgaactggtgcagggaagttaggaaacttgtgccattaaagactaatggt
gatggtaattgcctcctgcatgctgcatctcagtacatgtggggtgttcaagatgtggac
ctggtcctgaggaaaacactgttcttcgctctgcaggaagtggatacacgcaactttaag
cttcgttggcaactagagactgttaaatcgcaggattttgtagaaacaggactcctctat
aacaccaggaactgggaagaggaatgggagaacctcatcagtatgacatccccagaaaca
tcagtggcccgaagtgggcttcagtacaatgcactggaagaaatccatatatttgtcctt
gttaacatcctcagaaggccgatcatagttcttgcagataaaatgctgagaagcttggag
tccggttcaagctttgcccctctgaacgttggtggaatttacttgcctctccactggcca
gctgaagaatgctatagatatcctattgtcctgggctatgacagaatgcatttcacacca
ctggtcactctgaaggacagcgggccagaaatccgggctgtcccactggtcagcagtgaa
cgaggcaggtttgaagacttgaaggtgcactttctgacagacactgaggagatgggaaag
gagaagctactgaaagaatacctgatgttgatagagattccagtgcaaggctgggaccat
ggtacaactcatttaatttatgctgcaaagttagatgaaggcaacttacccaaagagata
aatctggtggaagattactttcaactggtacagcatgagtacaagaaatggcaaaagaac
aatacgcttattacgagggagccctacaccgggaatatactggaactgtccttaccccag
ttgtctcttgtagaggtgaaatgtgaaactcccaattgccccttctttatgtctgtgaac
acccagccctattgtcatgagtgctttgagcggaggcaacagggaaataaaccaaggaga
ccgagcgccaaaacagcatctgaaaagtcacggacgactggagcaggcccatctagggtt
gagttttgtgagcccgggggagggctatctgaagagccagtgacagggcctcattctgca
cctccaacagctccaagcctttttctgtatagtgaaaccaccgctatgaaatgcaggact
ccagattgcccttttacgttaaatgtgcaacacaatggactctgtgaacgctgctacaat
tccagacagctcagtccctctaacaacttggacaacctgcgacatttaaacagtgtgaca
tgtaaaatctgccttcaggacacgaacaggacctttaatggcatctgcacctcttgtctc
aaaaggactacagagccgtcaattgccaatcctgtcttcgtgccttcattccatcggcga
tctcactccgacccttcacagctatcccagagcttcctccagcattcttgtcatgcagca
cccagcaacgagctggaggagccgtcttcttcagaaatgcttcaggttcctcacaattcg
ttggaaaggaatggaagtagccagtgcagaaaacctggctgcacgttttttgggactcct
cagaatgaagggttttgcactctatgcttctttgagtacaaggaaaacaatggaagtgcc
tcactacttcatcagagaaggtctcaaaggaattcttctgcttctggtcagcctgggacc
tctgctgccacattccataacaccatttcctgcctggggcgagaatgtggcaccctgggc
agcagtatgcttgatgggtattgtcagaaatgttttattgaagcacagactcagcgattc
cgtgaagccataaggactgaacagcagctagtgggacaatctgaaagaactgggcaacac
agagacttactggtatcaacaatggggagccaaaagcgaaagtgttccacggcttcttgt
aggaacaacttagcctgcagaaacgatgagctgtgtcaggagtgccagcgagttcagtct
gggaatcctagagggccagctgcagaagagcctccgaaacagtgctgccgagccactggc
tgtgatcattatggcaataataagtgcaatggctactgcaatgaatgctaccagttcaaa
gagatgtatggctag
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integrated database retrieval system
