Trachemys scripta elegans (red-eared slider): 117876131
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Entry
117876131 CDS
T07347
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04620
Toll-like receptor signaling pathway
tst04621
NOD-like receptor signaling pathway
tst04622
RIG-I-like receptor signaling pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117876131 (TRAF3)
04621 NOD-like receptor signaling pathway
117876131 (TRAF3)
04622 RIG-I-like receptor signaling pathway
117876131 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117876131 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4
zf-C3HC4_2
Cast
Med28
FliJ
MPS2
CEP104_ZnF
Sina_ZnF
Tropomyosin
zf-C3HC4_4
ADIP
Crescentin
zf-RING_6
zf-RING_UBOX
Spc29
DUF1664
SPATA24
T3SSipB
KxDL
DUF3450
Motif
Other DBs
NCBI-GeneID:
117876131
NCBI-ProteinID:
XP_034623853
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All DBs
Position
4:complement(21597133..21697758)
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AA seq
566 aa
AA seq
DB search
MDTSKKTEPPVSVEMVQQRANPDHTPGSIYVPEQGGYKEKFVNTVEDKYKCEKCHLILCN
PKQTECGHRFCETCINVLLSSSNPKCTACQENIVKDKVFKDNCCRRELLALQIYCRNENK
GCNELLTLAQLLMHLRNDCQFEELSCHRADCREKILRKDLPDHVEKTCKYRETTCKYCKS
QVPMITLQKHEDTDCPSVAVSCPHKCSVTSLLRSELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKIHHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIMKSSVESLQNRVS
ELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGASRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaaaaagacagaaccccctgtgtctgtagaaatggtacaacaaagggcg
aaccctgatcacactccaggatcaatttatgttccagaacaaggcggttacaaagagaaa
tttgtaaacacagtggaggacaaatataaatgtgaaaagtgtcatctcatattgtgcaat
cctaaacagacggagtgtggccacagattctgtgaaacctgcattaatgtattgttaagt
tcttctaatccaaaatgtacagcgtgtcaagagaacatagttaaagataaggtatttaag
gataactgctgtaggagagagcttcttgcccttcagatatattgcagaaatgaaaacaaa
ggctgcaatgaactactaacactggcacaattactgatgcatttgagaaatgactgtcag
ttcgaagaactttcatgccaccgtgctgattgcagagagaaaatattgcggaaggacttg
ccagaccatgtagaaaagacctgtaaatatcgggaaactacatgtaaatactgtaaaagc
caagtcccaatgattacattacagaaacatgaagatacagactgcccctctgtcgcggtt
tcatgtcctcataaatgcagtgttacatcactcttgaggagtgagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgtaaattta
ttgaaagaatggagtaattctctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacatcatttacagcgagtg
atagacaatcaagcagagaaattgaaagaactggacaaagagatccgcccattccgacag
aattgggaggaggcagacatcatgaagagcagtgtggagtcccttcagaatagagtgagt
gaactggaaagcgttgataaaactgcaggacaaggagctcgaaatacagccgtactagag
acacagctaagtagacacgatcaaatgctgagtgttcatgatattcggttggctgacatg
gacctccgattccaggtgttagaaactgccagttacaatggagtattaatttggaaaatt
cgagattataaacgtcggaaacaagaggccgtcatggggaagactctgtcattgtacagc
cagcctttctatactggatactttggctataagatgtgtgccagagtttaccttaatgga
gatggcatgggaaaagggacgcacttgtcattgtttttcgtcataatgcgtggagaatat
gatgccttacttccttggccatttaaacagaaagtgactctgatgctaatggatcaggga
gcttctcgacgtcacttaggagatgctttcaagccagatccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaacagtg
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggatact
tcggatctaccagacccctga
DBGET
integrated database retrieval system
