Trachemys scripta elegans (red-eared slider): 117877029
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Entry
117877029 CDS
T07347
Name
(RefSeq) actin, aortic smooth muscle-like isoform X1
KO
K12314
actin, alpha cardiac muscle
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04260
Cardiac muscle contraction
tst04261
Adrenergic signaling in cardiomyocytes
tst04814
Motor proteins
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117877029
04820 Cytoskeleton in muscle cells
117877029
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117877029
04261 Adrenergic signaling in cardiomyocytes
117877029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117877029
04147 Exosome [BR:
tst04147
]
117877029
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
117877029
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117877029
Exosomal proteins of bladder cancer cells
117877029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
117877029
NCBI-ProteinID:
XP_034625612
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Position
4:81320129..81338884
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AA seq
377 aa
AA seq
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MCDEDETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGVHETTYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIGDRMQKEITALAPSTMKIKMIAPPERKYSVWIGGSILASLSTFQQMWIS
KDEYEEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgaagatgaaaccactgctcttgtatgtgacaatggctctgggctttgcaaa
gctggatttgcaggggatgatgcaccaagggctgtttttccatcgatcgttggacgtcct
cgacaccagggtgttatggtaggaatgggtcaaaaagacagttacgttggggatgaagcc
cagagtaaaagagggatcctgacactgaagtaccccattgagcatgggatcatcactaac
tgggatgacatggaaaagatttggcatcattctttctataatgaacttcgtgttgcccca
gaagagcatcctgtgctgctgaccgaggcccccttaaatcctaaggctaaccgggaaaaa
atgactcagatcatgtttgagactttcaatgtacctgctatgtatgtagcaattcaggca
gttctatctctatatgcatctggtcgaaccactggaatcgttctggactccggggatggt
gtcacacacaatgtacccatctatgaaggttatgctttgccccacgccatcatgaggctg
gacctggcaggcagagacctcaccgattatctcatgaaaattctcacagaaagaggctat
tctttcgtcaccactgcggagcgtgaaattgtgcgggacataaaggagaagctttgctac
gtggctttggattttgagaatgaaatggcaacagctgcttcctcttcttctctcgagaag
agttatgagcttcctgatgggcaagtcatcaccattgggaatgaaagattccgatgccca
gaaacgctcttccaaccttcattcataggaatggaatctgcaggtgttcatgaaaccact
tataacagcattatgaaatgtgatattgacatccgtaaggatctctatgctaataacgtg
ctctctgggggaacaacaatgtaccctggtattggtgatcgcatgcagaaagagattaca
gctttggctccaagtactatgaagattaagatgatcgcaccaccagaacgtaaatactcc
gtctggattggaggctcaatcttggcttctctgtctaccttccagcaaatgtggatcagc
aaagatgaatacgaggaagctggtccttccattgtccatcgcaaatgcttttga
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